Cifani P - Search Results

1

Relative quantification of membrane proteins in wild-type and prion protein (PrP)-knockout cerebellar granule neurons.

Stella R, Cifani P, Peggion C, Hansson K, Lazzari C, Bendz M, Levander F, Sorgato MC, Bertoli A, James P. Stella R, et al. Among authors: cifani p. J Proteome Res. 2012 Feb 3;11(2):523-36. doi: 10.1021/pr200759m. Epub 2011 Nov 18. J Proteome Res. 2012. PMID: 22023170

2

Hunting for protein markers of hypoxia by combining plasma membrane enrichment with a new approach to membrane protein analysis.

Cifani P, Bendz M, Wårell K, Hansson K, Levander F, Sandin M, Krogh M, Ovenberger M, Fredlund E, Vaapil M, Pietras A, Påhlman S, James P. Cifani P, et al. J Proteome Res. 2011 Apr 1;10(4):1645-56. doi: 10.1021/pr100982j. Epub 2011 Feb 23. J Proteome Res. 2011. PMID: 21235201

3

Critical comparison of multidimensional separation methods for increasing protein expression coverage.

Antberg L, Cifani P, Sandin M, Levander F, James P. Antberg L, et al. Among authors: cifani p. J Proteome Res. 2012 May 4;11(5):2644-52. doi: 10.1021/pr201257y. Epub 2012 Apr 6. J Proteome Res. 2012. PMID: 22449141

4

Multimodel pathway enrichment methods for functional evaluation of expression regulation.

Kirik U, Cifani P, Albrekt AS, Lindstedt M, Heyden A, Levander F. Kirik U, et al. Among authors: cifani p. J Proteome Res. 2012 May 4;11(5):2955-67. doi: 10.1021/pr300038b. Epub 2012 Apr 21. J Proteome Res. 2012. PMID: 22471554

5

Quantitative analysis of a phosphoproteome readily altered by the protein kinase CK2 inhibitor quinalizarin in HEK-293T cells.

Franchin C, Cesaro L, Salvi M, Millioni R, Iori E, Cifani P, James P, Arrigoni G, Pinna L. Franchin C, et al. Among authors: cifani p. Biochim Biophys Acta. 2015 Jun;1854(6):609-23. doi: 10.1016/j.bbapap.2014.09.017. Epub 2014 Sep 30. Biochim Biophys Acta. 2015. PMID: 25278378

6

Molecular Portrait of Breast-Cancer-Derived Cell Lines Reveals Poor Similarity with Tumors.

Cifani P, Kirik U, Waldemarson S, James P. Cifani P, et al. J Proteome Res. 2015 Jul 2;14(7):2819-27. doi: 10.1021/acs.jproteome.5b00375. Epub 2015 Jun 22. J Proteome Res. 2015. PMID: 26055192

7

Proteomic analysis of breast tumors confirms the mRNA intrinsic molecular subtypes using different classifiers: a large-scale analysis of fresh frozen tissue samples.

Waldemarson S, Kurbasic E, Krogh M, Cifani P, Berggård T, Borg Å, James P. Waldemarson S, et al. Among authors: cifani p. Breast Cancer Res. 2016 Jun 29;18(1):69. doi: 10.1186/s13058-016-0732-2. Breast Cancer Res. 2016. PMID: 27357824 Free PMC article.

8

A High-Efficiency Cellular Extraction System for Biological Proteomics.

Dhabaria A, Cifani P, Reed C, Steen H, Kentsis A. Dhabaria A, et al. Among authors: cifani p. J Proteome Res. 2015 Aug 7;14(8):3403-8. doi: 10.1021/acs.jproteome.5b00547. Epub 2015 Jul 14. J Proteome Res. 2015. PMID: 26153614 Free PMC article.

9

ProteomeGenerator: A Framework for Comprehensive Proteomics Based on de Novo Transcriptome Assembly and High-Accuracy Peptide Mass Spectral Matching.

Cifani P, Dhabaria A, Chen Z, Yoshimi A, Kawaler E, Abdel-Wahab O, Poirier JT, Kentsis A. Cifani P, et al. J Proteome Res. 2018 Nov 2;17(11):3681-3692. doi: 10.1021/acs.jproteome.8b00295. Epub 2018 Oct 19. J Proteome Res. 2018. PMID: 30295032 Free PMC article.

10

Optimized Cross-Linking Mass Spectrometry for in Situ Interaction Proteomics.

Ser Z, Cifani P, Kentsis A. Ser Z, et al. Among authors: cifani p. J Proteome Res. 2019 Jun 7;18(6):2545-2558. doi: 10.1021/acs.jproteome.9b00085. Epub 2019 May 24. J Proteome Res. 2019. PMID: 31083951 Free PMC article.

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