Butte AJ - Search Results

1

ProfileChaser: searching microarray repositories based on genome-wide patterns of differential expression.

Engreitz JM, Chen R, Morgan AA, Dudley JT, Mallelwar R, Butte AJ. Engreitz JM, et al. Among authors: butte aj. Bioinformatics. 2011 Dec 1;27(23):3317-8. doi: 10.1093/bioinformatics/btr548. Epub 2011 Oct 3. Bioinformatics. 2011. PMID: 21967760 Free PMC article.

2

Content-based microarray search using differential expression profiles.

Engreitz JM, Morgan AA, Dudley JT, Chen R, Thathoo R, Altman RB, Butte AJ. Engreitz JM, et al. Among authors: butte aj. BMC Bioinformatics. 2010 Dec 21;11:603. doi: 10.1186/1471-2105-11-603. BMC Bioinformatics. 2010. PMID: 21172034 Free PMC article.

3

Expression-based genome-wide association study links the receptor CD44 in adipose tissue with type 2 diabetes.

Kodama K, Horikoshi M, Toda K, Yamada S, Hara K, Irie J, Sirota M, Morgan AA, Chen R, Ohtsu H, Maeda S, Kadowaki T, Butte AJ. Kodama K, et al. Among authors: butte aj. Proc Natl Acad Sci U S A. 2012 May 1;109(18):7049-54. doi: 10.1073/pnas.1114513109. Epub 2012 Apr 12. Proc Natl Acad Sci U S A. 2012. PMID: 22499789 Free PMC article.

4

Data-driven integration of epidemiological and toxicological data to select candidate interacting genes and environmental factors in association with disease.

Patel CJ, Chen R, Butte AJ. Patel CJ, et al. Among authors: butte aj. Bioinformatics. 2012 Jun 15;28(12):i121-6. doi: 10.1093/bioinformatics/bts229. Bioinformatics. 2012. PMID: 22689751 Free PMC article.

5

Clinical utility of sequence-based genotype compared with that derivable from genotyping arrays.

Morgan AA, Chen R, Butte AJ. Morgan AA, et al. Among authors: butte aj. J Am Med Inform Assoc. 2012 Jun;19(e1):e21-7. doi: 10.1136/amiajnl-2011-000737. J Am Med Inform Assoc. 2012. PMID: 22718036 Free PMC article.

6

Multiplex meta-analysis of RNA expression to identify genes with variants associated with immune dysfunction.

Morgan AA, Pyrgos VJ, Nadeau KC, Williamson PR, Butte AJ. Morgan AA, et al. Among authors: butte aj. J Am Med Inform Assoc. 2012 Mar-Apr;19(2):284-8. doi: 10.1136/amiajnl-2011-000657. J Am Med Inform Assoc. 2012. PMID: 22319178 Free PMC article.

7

Ontology-driven indexing of public datasets for translational bioinformatics.

Shah NH, Jonquet C, Chiang AP, Butte AJ, Chen R, Musen MA. Shah NH, et al. Among authors: butte aj. BMC Bioinformatics. 2009 Feb 5;10 Suppl 2(Suppl 2):S1. doi: 10.1186/1471-2105-10-S2-S1. BMC Bioinformatics. 2009. PMID: 19208184 Free PMC article.

8

Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets.

Suthram S, Dudley JT, Chiang AP, Chen R, Hastie TJ, Butte AJ. Suthram S, et al. Among authors: butte aj. PLoS Comput Biol. 2010 Feb 5;6(2):e1000662. doi: 10.1371/journal.pcbi.1000662. PLoS Comput Biol. 2010. PMID: 20140234 Free PMC article.

9

Likelihood ratios for genome medicine.

Morgan AA, Chen R, Butte AJ. Morgan AA, et al. Among authors: butte aj. Genome Med. 2010 May 17;2(5):30. doi: 10.1186/gm151. Genome Med. 2010. PMID: 20497613 Free PMC article.

10

Biomarker and drug discovery for gastroenterology through translational bioinformatics.

Dudley JT, Butte AJ. Dudley JT, et al. Among authors: butte aj. Gastroenterology. 2010 Sep;139(3):735-41, 741.e1. doi: 10.1053/j.gastro.2010.07.024. Epub 2010 Jul 19. Gastroenterology. 2010. PMID: 20650279 Review. No abstract available.

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