Birch J - Search Results

1

Underwater application of quantitative PCR on an ocean mooring.

Preston CM, Harris A, Ryan JP, Roman B, Marin R 3rd, Jensen S, Everlove C, Birch J, Dzenitis JM, Pargett D, Adachi M, Turk K, Zehr JP, Scholin CA. Preston CM, et al. Among authors: birch j. PLoS One. 2011;6(8):e22522. doi: 10.1371/journal.pone.0022522. Epub 2011 Aug 1. PLoS One. 2011. PMID: 21829630 Free PMC article.

2

Near real-time, autonomous detection of marine bacterioplankton on a coastal mooring in Monterey Bay, California, using rRNA-targeted DNA probes.

Preston CM, Marin R 3rd, Jensen SD, Feldman J, Birch JM, Massion EI, Delong EF, Suzuki M, Wheeler K, Scholin CA. Preston CM, et al. Among authors: birch jm. Environ Microbiol. 2009 May;11(5):1168-80. doi: 10.1111/j.1462-2920.2009.01848.x. Epub 2009 Feb 5. Environ Microbiol. 2009. PMID: 19210704

3

Autonomous application of quantitative PCR in the deep sea: in situ surveys of aerobic methanotrophs using the deep-sea environmental sample processor.

Ussler W 3rd, Preston C, Tavormina P, Pargett D, Jensen S, Roman B, Marin R 3rd, Shah SR, Girguis PR, Birch JM, Orphan V, Scholin C. Ussler W 3rd, et al. Environ Sci Technol. 2013 Aug 20;47(16):9339-46. doi: 10.1021/es4023199. Epub 2013 Aug 8. Environ Sci Technol. 2013. PMID: 23883184

4

Simultaneous monitoring of faecal indicators and harmful algae using an in-situ autonomous sensor.

Yamahara KM, Demir-Hilton E, Preston CM, Marin R 3rd, Pargett D, Roman B, Jensen S, Birch JM, Boehm AB, Scholin CA. Yamahara KM, et al. Among authors: birch jm. Lett Appl Microbiol. 2015 Aug;61(2):130-8. doi: 10.1111/lam.12432. Epub 2015 May 29. Lett Appl Microbiol. 2015. PMID: 25900660

5

Recovery and identification of Pseudo-nitzschia (Bacillariophyceae) frustules from natural samples acquired using the environmental sample processor.

Bowers HA, Marin R 3rd, Birch JM, Scholin CA, Doucette GJ. Bowers HA, et al. Among authors: birch jm. J Phycol. 2016 Feb;52(1):135-40. doi: 10.1111/jpy.12369. Epub 2016 Jan 4. J Phycol. 2016. PMID: 26987095

6

Co-registered Geochemistry and Metatranscriptomics Reveal Unexpected Distributions of Microbial Activity within a Hydrothermal Vent Field.

Olins HC, Rogers DR, Preston C, Ussler W 3rd, Pargett D, Jensen S, Roman B, Birch JM, Scholin CA, Haroon MF, Girguis PR. Olins HC, et al. Front Microbiol. 2017 Jun 13;8:1042. doi: 10.3389/fmicb.2017.01042. eCollection 2017. Front Microbiol. 2017. PMID: 28659879 Free PMC article.

7

Sandwich hybridization probes for the detection of Pseudo-nitzschia (Bacillariophyceae) species: An update to existing probes and a description of new probes.

Bowers HA, Marin R 3rd, Birch JM, Scholin CA. Bowers HA, et al. Harmful Algae. 2017 Dec;70:37-51. doi: 10.1016/j.hal.2017.10.005. Epub 2017 Nov 1. Harmful Algae. 2017. PMID: 29169567

8

Diversity and toxicity of Pseudo-nitzschia species in Monterey Bay: Perspectives from targeted and adaptive sampling.

Bowers HA, Ryan JP, Hayashi K, Woods AL, Marin R 3rd, Smith GJ, Hubbard KA, Doucette GJ, Mikulski CM, Gellene AG, Zhang Y, Kudela RM, Caron DA, Birch JM, Scholin CA. Bowers HA, et al. Among authors: birch jm. Harmful Algae. 2018 Sep;78:129-141. doi: 10.1016/j.hal.2018.08.006. Epub 2018 Aug 31. Harmful Algae. 2018. PMID: 30196920

9

Microdiversity and temporal dynamics of marine bacterial dimethylsulfoniopropionate genes.

Nowinski B, Motard-Côté J, Landa M, Preston CM, Scholin CA, Birch JM, Kiene RP, Moran MA. Nowinski B, et al. Among authors: birch jm. Environ Microbiol. 2019 May;21(5):1687-1701. doi: 10.1111/1462-2920.14560. Epub 2019 Mar 12. Environ Microbiol. 2019. PMID: 30761723

10

Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.

Nowinski B, Smith CB, Thomas CM, Esson K, Marin R 3rd, Preston CM, Birch JM, Scholin CA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Whitman WB, Kiene RP, Eloe-Fadrosh EA, Moran MA. Nowinski B, et al. Sci Data. 2019 Jul 22;6(1):129. doi: 10.1038/s41597-019-0132-4. Sci Data. 2019. PMID: 31332186 Free PMC article.

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