Przytycka TM - Search Results

1

Guest editors' introduction to the special section on bioinformatics research and applications.

Borodovsky M, Przytycka TM, Rajasekaran S, Zelikovsky A. Borodovsky M, et al. Among authors: przytycka tm. IEEE/ACM Trans Comput Biol Bioinform. 2011 Jul-Aug;8(4):865-6. doi: 10.1109/tcbb.2011.92. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 21812137 No abstract available.

2

Improving strand pairing prediction through exploring folding cooperativity.

Jeong J, Berman P, Przytycka TM. Jeong J, et al. Among authors: przytycka tm. IEEE/ACM Trans Comput Biol Bioinform. 2008 Oct-Dec;5(4):484-91. doi: 10.1109/TCBB.2008.88. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18989036 Free PMC article.

3

Scale-free networks versus evolutionary drift.

Przytycka TM, Yu YK. Przytycka TM, et al. Comput Biol Chem. 2004 Oct;28(4):257-64. doi: 10.1016/j.compbiolchem.2004.07.001. Comput Biol Chem. 2004. PMID: 15548452 Free PMC article.

4

Bioinformatics pipeline using JUDI: Just Do It!

Pal S, Przytycka TM. Pal S, et al. Among authors: przytycka tm. Bioinformatics. 2020 Apr 15;36(8):2572-2574. doi: 10.1093/bioinformatics/btz956. Bioinformatics. 2020. PMID: 31882996 Free PMC article.

5

Fold classification based on secondary structure--how much is gained by including loop topology?

Jeong J, Berman P, Przytycka T. Jeong J, et al. BMC Struct Biol. 2006 Mar 8;6:3. doi: 10.1186/1472-6807-6-3. BMC Struct Biol. 2006. PMID: 16524467 Free PMC article.

6

AptaBlocks Online: A Web-Based Toolkit for the In Silico Design of Oligonucleotide Sticky Bridges.

Hoinka J, Wang Y, Przytycka TM. Hoinka J, et al. Among authors: przytycka tm. J Comput Biol. 2020 Mar;27(3):356-360. doi: 10.1089/cmb.2019.0470. J Comput Biol. 2020. PMID: 32160038 Free PMC article.

7

Modeling information flow in biological networks.

Kim YA, Przytycki JH, Wuchty S, Przytycka TM. Kim YA, et al. Among authors: przytycka tm. Phys Biol. 2011 Jun;8(3):035012. doi: 10.1088/1478-3975/8/3/035012. Epub 2011 May 13. Phys Biol. 2011. PMID: 21572171 Free PMC article. Review.

8

Co-evolutionary analysis of domains in interacting proteins reveals insights into domain-domain interactions mediating protein-protein interactions.

Jothi R, Cherukuri PF, Tasneem A, Przytycka TM. Jothi R, et al. Among authors: przytycka tm. J Mol Biol. 2006 Sep 29;362(4):861-75. doi: 10.1016/j.jmb.2006.07.072. Epub 2006 Aug 1. J Mol Biol. 2006. PMID: 16949097 Free PMC article.

9

Graph theoretical insights into evolution of multidomain proteins.

Przytycka T, Davis G, Song N, Durand D. Przytycka T, et al. J Comput Biol. 2006 Mar;13(2):351-63. doi: 10.1089/cmb.2006.13.351. J Comput Biol. 2006. PMID: 16597245 Free PMC article.

10

Toward the dynamic interactome: it's about time.

Przytycka TM, Singh M, Slonim DK. Przytycka TM, et al. Brief Bioinform. 2010 Jan;11(1):15-29. doi: 10.1093/bib/bbp057. Epub 2010 Jan 8. Brief Bioinform. 2010. PMID: 20061351 Free PMC article. Review.

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