Ke A - Search Results

1

Variable sequences outside the SAM-binding core critically influence the conformational dynamics of the SAM-III/SMK box riboswitch.

Lu C, Smith AM, Ding F, Chowdhury A, Henkin TM, Ke A. Lu C, et al. Among authors: ke a. J Mol Biol. 2011 Jun 24;409(5):786-99. doi: 10.1016/j.jmb.2011.04.039. Epub 2011 Apr 27. J Mol Biol. 2011. PMID: 21549712 Free PMC article.

2

A conformational switch controls hepatitis delta virus ribozyme catalysis.

Ke A, Zhou K, Ding F, Cate JH, Doudna JA. Ke A, et al. Nature. 2004 May 13;429(6988):201-5. doi: 10.1038/nature02522. Nature. 2004. PMID: 15141216

3

Structural roles of monovalent cations in the HDV ribozyme.

Ke A, Ding F, Batchelor JD, Doudna JA. Ke A, et al. Structure. 2007 Mar;15(3):281-7. doi: 10.1016/j.str.2007.01.017. Structure. 2007. PMID: 17355864 Free article.

4

Architecture of the yeast Rrp44 exosome complex suggests routes of RNA recruitment for 3' end processing.

Wang HW, Wang J, Ding F, Callahan K, Bratkowski MA, Butler JS, Nogales E, Ke A. Wang HW, et al. Among authors: ke a. Proc Natl Acad Sci U S A. 2007 Oct 23;104(43):16844-9. doi: 10.1073/pnas.0705526104. Epub 2007 Oct 17. Proc Natl Acad Sci U S A. 2007. PMID: 17942686 Free PMC article.

5

Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism.

Lu C, Smith AM, Fuchs RT, Ding F, Rajashankar K, Henkin TM, Ke A. Lu C, et al. Among authors: ke a. Nat Struct Mol Biol. 2008 Oct;15(10):1076-83. doi: 10.1038/nsmb.1494. Epub 2008 Sep 21. Nat Struct Mol Biol. 2008. PMID: 18806797 Free PMC article.

6

Crystal structure of the S. solfataricus archaeal exosome reveals conformational flexibility in the RNA-binding ring.

Lu C, Ding F, Ke A. Lu C, et al. Among authors: ke a. PLoS One. 2010 Jan 15;5(1):e8739. doi: 10.1371/journal.pone.0008739. PLoS One. 2010. PMID: 20090900 Free PMC article.

7

SAM recognition and conformational switching mechanism in the Bacillus subtilis yitJ S box/SAM-I riboswitch.

Lu C, Ding F, Chowdhury A, Pradhan V, Tomsic J, Holmes WM, Henkin TM, Ke A. Lu C, et al. Among authors: ke a. J Mol Biol. 2010 Dec 17;404(5):803-18. doi: 10.1016/j.jmb.2010.09.059. Epub 2010 Oct 15. J Mol Biol. 2010. PMID: 20951706 Free PMC article.

8

Structure and assembly of the essential RNA ring component of a viral DNA packaging motor.

Ding F, Lu C, Zhao W, Rajashankar KR, Anderson DL, Jardine PJ, Grimes S, Ke A. Ding F, et al. Among authors: ke a. Proc Natl Acad Sci U S A. 2011 May 3;108(18):7357-62. doi: 10.1073/pnas.1016690108. Epub 2011 Apr 6. Proc Natl Acad Sci U S A. 2011. PMID: 21471452 Free PMC article.

9

Engineering antibody fitness and function using membrane-anchored display of correctly folded proteins.

Karlsson AJ, Lim HK, Xu H, Rocco MA, Bratkowski MA, Ke A, DeLisa MP. Karlsson AJ, et al. Among authors: ke a. J Mol Biol. 2012 Feb 10;416(1):94-107. doi: 10.1016/j.jmb.2011.12.021. Epub 2011 Dec 16. J Mol Biol. 2012. PMID: 22197376 Free PMC article.

10

Elastic coupling between RNA degradation and unwinding by an exoribonuclease.

Lee G, Bratkowski MA, Ding F, Ke A, Ha T. Lee G, et al. Among authors: ke a. Science. 2012 Jun 29;336(6089):1726-9. doi: 10.1126/science.1216848. Science. 2012. PMID: 22745434 Free PMC article.

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