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Optimal neutrality tests based on the frequency spectrum.
Ferretti L, Perez-Enciso M, Ramos-Onsins S. Ferretti L, et al. Genetics. 2010 Sep;186(1):353-65. doi: 10.1534/genetics.110.118570. Epub 2010 Jul 6. Genetics. 2010. PMID: 20610408 Free PMC article.
Worldwide genetic relationships of pigs as inferred from X chromosome SNPs.
Burgos-Paz W, Souza CA, Castelló A, Mercadé A, Okumura N, Sheremet'eva IN, Huang LS, Cho IC, Paiva SR, Ramos-Onsins S, Pérez-Enciso M. Burgos-Paz W, et al. Anim Genet. 2013 Apr;44(2):130-8. doi: 10.1111/j.1365-2052.2012.02374.x. Epub 2012 May 17. Anim Genet. 2013. PMID: 22590984
SNP calling by sequencing pooled samples.
Raineri E, Ferretti L, Esteve-Codina A, Nevado B, Heath S, Pérez-Enciso M. Raineri E, et al. BMC Bioinformatics. 2012 Sep 20;13:239. doi: 10.1186/1471-2105-13-239. BMC Bioinformatics. 2012. PMID: 22992255 Free PMC article.
Analyses of pig genomes provide insight into porcine demography and evolution.
Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott… See abstract for full author list ➔ Groenen MA, et al. Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622. Nature. 2012. PMID: 23151582 Free PMC article.
Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.
Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G. Ottoni C, et al. Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22. Mol Biol Evol. 2013. PMID: 23180578 Free PMC article.
Porcine colonization of the Americas: a 60k SNP story.
Burgos-Paz W, Souza CA, Megens HJ, Ramayo-Caldas Y, Melo M, Lemús-Flores C, Caal E, Soto HW, Martínez R, Alvarez LA, Aguirre L, Iñiguez V, Revidatti MA, Martínez-López OR, Llambi S, Esteve-Codina A, Rodríguez MC, Crooijmans RP, Paiva SR, Schook LB, Groenen MA, Pérez-Enciso M. Burgos-Paz W, et al. Heredity (Edinb). 2013 Apr;110(4):321-30. doi: 10.1038/hdy.2012.109. Epub 2012 Dec 19. Heredity (Edinb). 2013. PMID: 23250008 Free PMC article.
132 results