Tark-Dame M - Search Results

1

Chromatin folding--from biology to polymer models and back.

Tark-Dame M, van Driel R, Heermann DW. Tark-Dame M, et al. J Cell Sci. 2011 Mar 15;124(Pt 6):839-45. doi: 10.1242/jcs.077628. J Cell Sci. 2011. PMID: 21378305

2

Depletion of the chromatin looping proteins CTCF and cohesin causes chromatin compaction: insight into chromatin folding by polymer modelling.

Tark-Dame M, Jerabek H, Manders EM, van der Wateren IM, Heermann DW, van Driel R. Tark-Dame M, et al. PLoS Comput Biol. 2014 Oct 9;10(10):e1003877. doi: 10.1371/journal.pcbi.1003877. eCollection 2014 Oct. PLoS Comput Biol. 2014. PMID: 25299688 Free PMC article.

3

Bacterial chromatin: converging views at different scales.

Dame RT, Tark-Dame M. Dame RT, et al. Among authors: tark dame m. Curr Opin Cell Biol. 2016 Jun;40:60-65. doi: 10.1016/j.ceb.2016.02.015. Epub 2016 Mar 1. Curr Opin Cell Biol. 2016. PMID: 26942688 Review.

4

dCas9: A Versatile Tool for Epigenome Editing.

Brocken DJW, Tark-Dame M, Dame RT. Brocken DJW, et al. Among authors: tark dame m. Curr Issues Mol Biol. 2018;26:15-32. doi: 10.21775/cimb.026.015. Epub 2017 Sep 7. Curr Issues Mol Biol. 2018. PMID: 28879853 Free article. Review.

5

3D genome organization: a role for phase separation and loop extrusion?

Stam M, Tark-Dame M, Fransz P. Stam M, et al. Among authors: tark dame m. Curr Opin Plant Biol. 2019 Apr;48:36-46. doi: 10.1016/j.pbi.2019.03.008. Epub 2019 Apr 28. Curr Opin Plant Biol. 2019. PMID: 31035031 Review.

6

A physical approach to segregation and folding of the Caulobacter crescentus genome.

Dame RT, Tark-Dame M, Schiessel H. Dame RT, et al. Mol Microbiol. 2011 Dec;82(6):1311-5. doi: 10.1111/j.1365-2958.2011.07898.x. Epub 2011 Nov 22. Mol Microbiol. 2011. PMID: 22029843 Free article.

7

Homologous recombination is facilitated in starving populations of Pseudomonas putida by phenol stress and affected by chromosomal location of the recombination target.

Tavita K, Mikkel K, Tark-Dame M, Jerabek H, Teras R, Sidorenko J, Tegova R, Tover A, Dame RT, Kivisaar M. Tavita K, et al. Among authors: tark dame m. Mutat Res. 2012 Sep 1;737(1-2):12-24. doi: 10.1016/j.mrfmmm.2012.07.004. Epub 2012 Aug 10. Mutat Res. 2012. PMID: 22917545

8

Generating Transgenic Plants with Single-copy Insertions Using BIBAC-GW Binary Vector.

Tark-Dame M, Weber B, de Sain M, Anggoro DT, Bader R, Walmsley A, Oka R, Stam M. Tark-Dame M, et al. J Vis Exp. 2018 Mar 28;(133):57295. doi: 10.3791/57295. J Vis Exp. 2018. PMID: 29658919 Free PMC article.

9

BIBAC-GW-based vectors for generating reporter lines for site-specific genome editing in planta.

Anggoro DT, Tark-Dame M, Walmsley A, Oka R, de Sain M, Stam M. Anggoro DT, et al. Among authors: tark dame m. Plasmid. 2017 Jan;89:27-36. doi: 10.1016/j.plasmid.2016.12.002. Epub 2016 Dec 26. Plasmid. 2017. PMID: 28034789

10

Involvement of specialized DNA polymerases Pol II, Pol IV and DnaE2 in DNA replication in the absence of Pol I in Pseudomonas putida.

Sidorenko J, Jatsenko T, Saumaa S, Teras R, Tark-Dame M, Hõrak R, Kivisaar M. Sidorenko J, et al. Mutat Res. 2011 Sep 1;714(1-2):63-77. doi: 10.1016/j.mrfmmm.2011.06.013. Epub 2011 Jul 6. Mutat Res. 2011. PMID: 21763330

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