Kopka J - Search Results

1

Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics.

Moing A, Aharoni A, Biais B, Rogachev I, Meir S, Brodsky L, Allwood JW, Erban A, Dunn WB, Kay L, de Koning S, de Vos RC, Jonker H, Mumm R, Deborde C, Maucourt M, Bernillon S, Gibon Y, Hansen TH, Husted S, Goodacre R, Kopka J, Schjoerring JK, Rolin D, Hall RD. Moing A, et al. Among authors: kopka j. New Phytol. 2011 May;190(3):683-96. doi: 10.1111/j.1469-8137.2010.03626.x. Epub 2011 Jan 28. New Phytol. 2011. PMID: 21275993 Free article.

2

Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites.

Engelsberger WR, Erban A, Kopka J, Schulze WX. Engelsberger WR, et al. Among authors: kopka j. Plant Methods. 2006 Sep 4;2:14. doi: 10.1186/1746-4811-2-14. Plant Methods. 2006. PMID: 16948866 Free PMC article.

3

Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles.

Erban A, Schauer N, Fernie AR, Kopka J. Erban A, et al. Among authors: kopka j. Methods Mol Biol. 2007;358:19-38. doi: 10.1007/978-1-59745-244-1_2. Methods Mol Biol. 2007. PMID: 17035678

4

Hybrid weakness controlled by the dosage-dependent lethal (DL) gene system in common bean (Phaseolus vulgaris) is caused by a shoot-derived inhibitory signal leading to salicylic acid-associated root death.

Hannah MA, Krämer KM, Geffroy V, Kopka J, Blair MW, Erban A, Vallejos CE, Heyer AG, Sanders FET, Millner PA, Pilbeam DJ. Hannah MA, et al. Among authors: kopka j. New Phytol. 2007;176(3):537-549. doi: 10.1111/j.1469-8137.2007.02215.x. Epub 2007 Sep 10. New Phytol. 2007. PMID: 17850251 Free article.

5

Predicting Arabidopsis freezing tolerance and heterosis in freezing tolerance from metabolite composition.

Korn M, Gärtner T, Erban A, Kopka J, Selbig J, Hincha DK. Korn M, et al. Among authors: kopka j. Mol Plant. 2010 Jan;3(1):224-35. doi: 10.1093/mp/ssp105. Epub 2009 Dec 21. Mol Plant. 2010. PMID: 20026477 Free PMC article.

6

Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics.

Allwood JW, Erban A, de Koning S, Dunn WB, Luedemann A, Lommen A, Kay L, Löscher R, Kopka J, Goodacre R. Allwood JW, et al. Among authors: kopka j. Metabolomics. 2009 Dec;5(4):479-496. doi: 10.1007/s11306-009-0169-z. Epub 2009 Jul 24. Metabolomics. 2009. PMID: 20376177 Free PMC article.

7

Identification of Arabidopsis mutants impaired in the systemic regulation of root nitrate uptake by the nitrogen status of the plant.

Girin T, El-Kafafi el-S, Widiez T, Erban A, Hubberten HM, Kopka J, Hoefgen R, Gojon A, Lepetit M. Girin T, et al. Among authors: kopka j. Plant Physiol. 2010 Jul;153(3):1250-60. doi: 10.1104/pp.110.157354. Epub 2010 May 6. Plant Physiol. 2010. PMID: 20448103 Free PMC article.

8

Comparative metabolomics of drought acclimation in model and forage legumes.

Sanchez DH, Schwabe F, Erban A, Udvardi MK, Kopka J. Sanchez DH, et al. Among authors: kopka j. Plant Cell Environ. 2012 Jan;35(1):136-49. doi: 10.1111/j.1365-3040.2011.02423.x. Epub 2011 Oct 12. Plant Cell Environ. 2012. PMID: 21902697 Free article.

9

Plant metabolomics and its potential for systems biology research background concepts, technology, and methodology.

Allwood JW, De Vos RC, Moing A, Deborde C, Erban A, Kopka J, Goodacre R, Hall RD. Allwood JW, et al. Among authors: kopka j. Methods Enzymol. 2011;500:299-336. doi: 10.1016/B978-0-12-385118-5.00016-5. Methods Enzymol. 2011. PMID: 21943904 Review.

10

TagFinder: preprocessing software for the fingerprinting and the profiling of gas chromatography-mass spectrometry based metabolome analyses.

Luedemann A, von Malotky L, Erban A, Kopka J. Luedemann A, et al. Among authors: kopka j. Methods Mol Biol. 2012;860:255-86. doi: 10.1007/978-1-61779-594-7_16. Methods Mol Biol. 2012. PMID: 22351182

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