Holstege F - Search Results

1

Epistatic relationships reveal the functional organization of yeast transcription factors.

Zheng J, Benschop JJ, Shales M, Kemmeren P, Greenblatt J, Cagney G, Holstege F, Li H, Krogan NJ. Zheng J, et al. Among authors: holstege f. Mol Syst Biol. 2010 Oct 5;6:420. doi: 10.1038/msb.2010.77. Mol Syst Biol. 2010. PMID: 20959818 Free PMC article.

2

An unusual eukaryotic protein phosphatase required for transcription by RNA polymerase II and CTD dephosphorylation in S. cerevisiae.

Kobor MS, Archambault J, Lester W, Holstege FC, Gileadi O, Jansma DB, Jennings EG, Kouyoumdjian F, Davidson AR, Young RA, Greenblatt J. Kobor MS, et al. Among authors: holstege fc. Mol Cell. 1999 Jul;4(1):55-62. doi: 10.1016/s1097-2765(00)80187-2. Mol Cell. 1999. PMID: 10445027 Free article.

3

Protein interaction verification and functional annotation by integrated analysis of genome-scale data.

Kemmeren P, van Berkum NL, Vilo J, Bijma T, Donders R, Brazma A, Holstege FC. Kemmeren P, et al. Mol Cell. 2002 May;9(5):1133-43. doi: 10.1016/s1097-2765(02)00531-2. Mol Cell. 2002. PMID: 12049748 Free article.

4

Monitoring global messenger RNA changes in externally controlled microarray experiments.

van de Peppel J, Kemmeren P, van Bakel H, Radonjic M, van Leenen D, Holstege FC. van de Peppel J, et al. EMBO Rep. 2003 Apr;4(4):387-93. doi: 10.1038/sj.embor.embor798. EMBO Rep. 2003. PMID: 12671682 Free PMC article.

5

Integrating functional genomics data.

Kemmeren P, Holstege FC. Kemmeren P, et al. Among authors: holstege fc. Biochem Soc Trans. 2003 Dec;31(Pt 6):1484-7. doi: 10.1042/bst0311484. Biochem Soc Trans. 2003. PMID: 14641095 Review.

6

Nitric oxide donor induces temporal and dose-dependent reduction of gene expression in human endothelial cells.

Braam B, de Roos R, Dijk A, Boer P, Post JA, Kemmeren PP, Holstege FC, Bluysen HA, Koomans HA. Braam B, et al. Am J Physiol Heart Circ Physiol. 2004 Nov;287(5):H1977-86. doi: 10.1152/ajpheart.00323.2004. Epub 2004 Jul 8. Am J Physiol Heart Circ Physiol. 2004. PMID: 15242832 Free article.

7

Predicting gene function through systematic analysis and quality assessment of high-throughput data.

Kemmeren P, Kockelkorn TT, Bijma T, Donders R, Holstege FC. Kemmeren P, et al. Bioinformatics. 2005 Apr 15;21(8):1644-52. doi: 10.1093/bioinformatics/bti103. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531615

AVAILABILITY: Free availability over the Internet. CONTACT: f.c.p.holstege@med.uu.nl SUPPLEMENTARY INFORMATION: http://www.genomics.med.uu.nl/pub/pk/comb_gen_network....

AVAILABILITY: Free availability over the Internet. CONTACT: f.c.p.holstege@med.uu.nl SUPPLEMENTARY INFORMATION: http://www.gen …

8

An expression profile for diagnosis of lymph node metastases from primary head and neck squamous cell carcinomas.

Roepman P, Wessels LF, Kettelarij N, Kemmeren P, Miles AJ, Lijnzaad P, Tilanus MG, Koole R, Hordijk GJ, van der Vliet PC, Reinders MJ, Slootweg PJ, Holstege FC. Roepman P, et al. Among authors: holstege fc. Nat Genet. 2005 Feb;37(2):182-6. doi: 10.1038/ng1502. Epub 2005 Jan 9. Nat Genet. 2005. PMID: 15640797

9

Nitric oxide-dependent and nitric oxide-independent transcriptional responses to high shear stress in endothelial cells.

Braam B, de Roos R, Bluyssen H, Kemmeren P, Holstege F, Joles JA, Koomans H. Braam B, et al. Among authors: holstege f. Hypertension. 2005 Apr;45(4):672-80. doi: 10.1161/01.HYP.0000154683.33414.94. Epub 2005 Feb 7. Hypertension. 2005. PMID: 15699468

10

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, van Leenen D, van Berkum NL, Holstege FC. Radonjic M, et al. Mol Cell. 2005 Apr 15;18(2):171-83. doi: 10.1016/j.molcel.2005.03.010. Mol Cell. 2005. PMID: 15837421 Free article.

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