Goloborodko AA - Search Results

1

Retention time prediction using the model of liquid chromatography of biomacromolecules at critical conditions in LC-MS phosphopeptide analysis.

Perlova TY, Goloborodko AA, Margolin Y, Pridatchenko ML, Tarasova IA, Gorshkov AV, Moskovets E, Ivanov AR, Gorshkov MV. Perlova TY, et al. Among authors: goloborodko aa. Proteomics. 2010 Oct;10(19):3458-68. doi: 10.1002/pmic.200900837. Proteomics. 2010. PMID: 20815086

2

Empirical approach to false discovery rate estimation in shotgun proteomics.

Goloborodko AA, Mayerhofer C, Zubarev AR, Tarasova IA, Gorshkov AV, Zubarev RA, Gorshkov MV. Goloborodko AA, et al. Rapid Commun Mass Spectrom. 2010 Feb;24(4):454-62. doi: 10.1002/rcm.4417. Rapid Commun Mass Spectrom. 2010. PMID: 20069687

3

On the utility of predictive chromatography to complement mass spectrometry based intact protein identification.

Pridatchenko ML, Perlova TY, Ben Hamidane H, Goloborodko AA, Tarasova IA, Gorshkov AV, Evreinov VV, Tsybin YO, Gorshkov MV. Pridatchenko ML, et al. Among authors: goloborodko aa. Anal Bioanal Chem. 2012 Mar;402(8):2521-9. doi: 10.1007/s00216-011-5350-3. Epub 2011 Sep 8. Anal Bioanal Chem. 2012. PMID: 21901462

4

Application of Statistical Thermodynamics To Predict the Adsorption Properties of Polypeptides in Reversed-Phase HPLC.

Tarasova IA, Goloborodko AA, Perlova TY, Pridatchenko ML, Gorshkov AV, Evreinov VV, Ivanov AR, Gorshkov MV. Tarasova IA, et al. Among authors: goloborodko aa. Anal Chem. 2015 Jul 7;87(13):6562-9. doi: 10.1021/acs.analchem.5b00595. Epub 2015 Jun 10. Anal Chem. 2015. PMID: 26023813

5

Sequence-specific predictive chromatography to assist mass spectrometric analysis of asparagine deamidation and aspartate isomerization in peptides.

Sargaeva NP, Goloborodko AA, O'Connor PB, Moskovets E, Gorshkov MV. Sargaeva NP, et al. Among authors: goloborodko aa. Electrophoresis. 2011 Aug;32(15):1962-9. doi: 10.1002/elps.201000507. Epub 2011 May 9. Electrophoresis. 2011. PMID: 21557257

6

Sequence scrambling in shotgun proteomics is negligible.

Goloborodko AA, Gorshkov MV, Good DM, Zubarev RA. Goloborodko AA, et al. J Am Soc Mass Spectrom. 2011 Jul;22(7):1121-4. doi: 10.1007/s13361-011-0130-z. Epub 2011 Apr 15. J Am Soc Mass Spectrom. 2011. PMID: 21953093

7

Limitation of predictive 2-D liquid chromatography in reducing the database search space in shotgun proteomics: in silico studies.

Moskovets E, Goloborodko AA, Gorshkov AV, Gorshkov MV. Moskovets E, et al. Among authors: goloborodko aa. J Sep Sci. 2012 Jul;35(14):1771-8. doi: 10.1002/jssc.201100798. J Sep Sci. 2012. PMID: 22807359

8

Combination of Edman degradation of peptides with liquid chromatography/mass spectrometry workflow for peptide identification in bottom-up proteomics.

Lobas AA, Verenchikov AN, Goloborodko AA, Levitsky LI, Gorshkov MV. Lobas AA, et al. Among authors: goloborodko aa. Rapid Commun Mass Spectrom. 2013 Feb 15;27(3):391-400. doi: 10.1002/rcm.6462. Rapid Commun Mass Spectrom. 2013. PMID: 23280970

9

Pyteomics--a Python framework for exploratory data analysis and rapid software prototyping in proteomics.

Goloborodko AA, Levitsky LI, Ivanov MV, Gorshkov MV. Goloborodko AA, et al. J Am Soc Mass Spectrom. 2013 Feb;24(2):301-4. doi: 10.1007/s13361-012-0516-6. Epub 2013 Jan 5. J Am Soc Mass Spectrom. 2013. PMID: 23292976

10

Iterative correction of Hi-C data reveals hallmarks of chromosome organization.

Imakaev M, Fudenberg G, McCord RP, Naumova N, Goloborodko A, Lajoie BR, Dekker J, Mirny LA. Imakaev M, et al. Nat Methods. 2012 Oct;9(10):999-1003. doi: 10.1038/nmeth.2148. Epub 2012 Sep 2. Nat Methods. 2012. PMID: 22941365 Free PMC article.

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