Martin DP - Search Results

1

RDP3: a flexible and fast computer program for analyzing recombination.

Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P. Martin DP, et al. Bioinformatics. 2010 Oct 1;26(19):2462-3. doi: 10.1093/bioinformatics/btq467. Epub 2010 Aug 26. Bioinformatics. 2010. PMID: 20798170 Free PMC article.

2

RDP: detection of recombination amongst aligned sequences.

Martin D, Rybicki E. Martin D, et al. Bioinformatics. 2000 Jun;16(6):562-3. doi: 10.1093/bioinformatics/16.6.562. Bioinformatics. 2000. PMID: 10980155

3

RDP2: recombination detection and analysis from sequence alignments.

Martin DP, Williamson C, Posada D. Martin DP, et al. Bioinformatics. 2005 Jan 15;21(2):260-2. doi: 10.1093/bioinformatics/bth490. Epub 2004 Sep 17. Bioinformatics. 2005. PMID: 15377507

4

Widespread recombination in published animal mtDNA sequences.

Tsaousis AD, Martin DP, Ladoukakis ED, Posada D, Zouros E. Tsaousis AD, et al. Among authors: martin dp. Mol Biol Evol. 2005 Apr;22(4):925-33. doi: 10.1093/molbev/msi084. Epub 2005 Jan 12. Mol Biol Evol. 2005. PMID: 15647518

5

A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints.

Martin DP, Posada D, Crandall KA, Williamson C. Martin DP, et al. AIDS Res Hum Retroviruses. 2005 Jan;21(1):98-102. doi: 10.1089/aid.2005.21.98. AIDS Res Hum Retroviruses. 2005. PMID: 15665649

6

The evolutionary value of recombination is constrained by genome modularity.

Martin DP, van der Walt E, Posada D, Rybicki EP. Martin DP, et al. PLoS Genet. 2005 Oct;1(4):e51. doi: 10.1371/journal.pgen.0010051. PLoS Genet. 2005. PMID: 16244707 Free PMC article.

7

Robust inference of positive selection from recombining coding sequences.

Scheffler K, Martin DP, Seoighe C. Scheffler K, et al. Among authors: martin dp. Bioinformatics. 2006 Oct 15;22(20):2493-9. doi: 10.1093/bioinformatics/btl427. Epub 2006 Aug 7. Bioinformatics. 2006. PMID: 16895925

8

Begomovirus 'melting pot' in the south-west Indian Ocean islands: molecular diversity and evolution through recombination.

Lefeuvre P, Martin DP, Hoareau M, Naze F, Delatte H, Thierry M, Varsani A, Becker N, Reynaud B, Lett JM. Lefeuvre P, et al. Among authors: martin dp. J Gen Virol. 2007 Dec;88(Pt 12):3458-3468. doi: 10.1099/vir.0.83252-0. J Gen Virol. 2007. PMID: 18024917

9

Avoidance of protein fold disruption in natural virus recombinants.

Lefeuvre P, Lett JM, Reynaud B, Martin DP. Lefeuvre P, et al. Among authors: martin dp. PLoS Pathog. 2007 Nov;3(11):e181. doi: 10.1371/journal.ppat.0030181. PLoS Pathog. 2007. PMID: 18052529 Free PMC article.

10

Panicum streak virus diversity is similar to that observed for maize streak virus.

Varsani A, Oluwafemi S, Windram OP, Shepherd DN, Monjane AL, Owor BE, Rybicki EP, Lefeuvre P, Martin DP. Varsani A, et al. Among authors: martin dp. Arch Virol. 2008;153(3):601-4. doi: 10.1007/s00705-007-0020-7. Epub 2008 Jan 3. Arch Virol. 2008. PMID: 18172570 No abstract available.

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