Karaoz U - Search Results

1

Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients.

Cox MJ, Allgaier M, Taylor B, Baek MS, Huang YJ, Daly RA, Karaoz U, Andersen GL, Brown R, Fujimura KE, Wu B, Tran D, Koff J, Kleinhenz ME, Nielson D, Brodie EL, Lynch SV. Cox MJ, et al. Among authors: karaoz u. PLoS One. 2010 Jun 23;5(6):e11044. doi: 10.1371/journal.pone.0011044. PLoS One. 2010. PMID: 20585638 Free PMC article.

2

Structure of the human gastric bacterial community in relation to Helicobacter pylori status.

Maldonado-Contreras A, Goldfarb KC, Godoy-Vitorino F, Karaoz U, Contreras M, Blaser MJ, Brodie EL, Dominguez-Bello MG. Maldonado-Contreras A, et al. Among authors: karaoz u. ISME J. 2011 Apr;5(4):574-9. doi: 10.1038/ismej.2010.149. Epub 2010 Oct 7. ISME J. 2011. PMID: 20927139 Free PMC article.

3

Simrank: Rapid and sensitive general-purpose k-mer search tool.

DeSantis TZ, Keller K, Karaoz U, Alekseyenko AV, Singh NN, Brodie EL, Pei Z, Andersen GL, Larsen N. DeSantis TZ, et al. Among authors: karaoz u. BMC Ecol. 2011 Apr 27;11:11. doi: 10.1186/1472-6785-11-11. BMC Ecol. 2011. PMID: 21524302 Free PMC article.

4

Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows.

Godoy-Vitorino F, Goldfarb KC, Karaoz U, Leal S, Garcia-Amado MA, Hugenholtz P, Tringe SG, Brodie EL, Dominguez-Bello MG. Godoy-Vitorino F, et al. Among authors: karaoz u. ISME J. 2012 Mar;6(3):531-41. doi: 10.1038/ismej.2011.131. Epub 2011 Sep 22. ISME J. 2012. PMID: 21938024 Free PMC article.

5

Genomic and physiological characterization of the chromate-reducing, aquifer-derived Firmicute Pelosinus sp. strain HCF1.

Beller HR, Han R, Karaoz U, Lim H, Brodie EL. Beller HR, et al. Among authors: karaoz u. Appl Environ Microbiol. 2013 Jan;79(1):63-73. doi: 10.1128/AEM.02496-12. Epub 2012 Oct 12. Appl Environ Microbiol. 2013. PMID: 23064329 Free PMC article.

6

Compartmentalized microbial composition, oxygen gradients and nitrogen fixation in the gut of Odontotaenius disjunctus.

Ceja-Navarro JA, Nguyen NH, Karaoz U, Gross SR, Herman DJ, Andersen GL, Bruns TD, Pett-Ridge J, Blackwell M, Brodie EL. Ceja-Navarro JA, et al. Among authors: karaoz u. ISME J. 2014 Jan;8(1):6-18. doi: 10.1038/ismej.2013.134. Epub 2013 Aug 29. ISME J. 2014. PMID: 23985746 Free PMC article.

7

Divergent aquifer biogeochemical systems converge on similar and unexpected Cr(VI) reduction products.

Beller HR, Yang L, Varadharajan C, Han R, Lim HC, Karaoz U, Molins S, Marcus MA, Brodie EL, Steefel CI, Nico PS. Beller HR, et al. Among authors: karaoz u. Environ Sci Technol. 2014 Sep 16;48(18):10699-706. doi: 10.1021/es5016982. Epub 2014 Aug 13. Environ Sci Technol. 2014. PMID: 25084058

8

Use of 16S rRNA gene for identification of a broad range of clinically relevant bacterial pathogens.

Srinivasan R, Karaoz U, Volegova M, MacKichan J, Kato-Maeda M, Miller S, Nadarajan R, Brodie EL, Lynch SV. Srinivasan R, et al. Among authors: karaoz u. PLoS One. 2015 Feb 6;10(2):e0117617. doi: 10.1371/journal.pone.0117617. eCollection 2015. PLoS One. 2015. PMID: 25658760 Free PMC article.

9

Gut microbiota mediate caffeine detoxification in the primary insect pest of coffee.

Ceja-Navarro JA, Vega FE, Karaoz U, Hao Z, Jenkins S, Lim HC, Kosina P, Infante F, Northen TR, Brodie EL. Ceja-Navarro JA, et al. Among authors: karaoz u. Nat Commun. 2015 Jul 14;6:7618. doi: 10.1038/ncomms8618. Nat Commun. 2015. PMID: 26173063 Free PMC article.

10

Metatranscriptomic evidence of pervasive and diverse chemolithoautotrophy relevant to C, S, N and Fe cycling in a shallow alluvial aquifer.

Jewell TN, Karaoz U, Brodie EL, Williams KH, Beller HR. Jewell TN, et al. Among authors: karaoz u. ISME J. 2016 Sep;10(9):2106-17. doi: 10.1038/ismej.2016.25. Epub 2016 Mar 4. ISME J. 2016. PMID: 26943628 Free PMC article.

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