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Page 1
A three-dimensional model of the yeast genome.
Duan Z, Andronescu M, Schutz K, McIlwain S, Kim YJ, Lee C, Shendure J, Fields S, Blau CA, Noble WS. Duan Z, et al. Among authors: mcilwain s. Nature. 2010 May 20;465(7296):363-7. doi: 10.1038/nature08973. Epub 2010 May 2. Nature. 2010. PMID: 20436457 Free PMC article.
Crux: rapid open source protein tandem mass spectrometry analysis.
McIlwain S, Tamura K, Kertesz-Farkas A, Grant CE, Diament B, Frewen B, Howbert JJ, Hoopmann MR, Käll L, Eng JK, MacCoss MJ, Noble WS. McIlwain S, et al. J Proteome Res. 2014 Oct 3;13(10):4488-91. doi: 10.1021/pr500741y. Epub 2014 Sep 9. J Proteome Res. 2014. PMID: 25182276 Free PMC article.
Matching isotopic distributions from metabolically labeled samples.
McIlwain S, Page D, Huttlin EL, Sussman MR. McIlwain S, et al. Bioinformatics. 2008 Jul 1;24(13):i339-47. doi: 10.1093/bioinformatics/btn190. Bioinformatics. 2008. PMID: 18586733 Free PMC article.
If we only require that the 'monoisotopic' peaks exist within the two matched distributions, our algorithm obtains a positive rate of 45% and a false positive rate of 1% on the 'machine' selected data. Changes to the algorithm's scoring function and training example genera …
If we only require that the 'monoisotopic' peaks exist within the two matched distributions, our algorithm obtains a positive rate of 45% an …
Prion disease diagnosis by proteomic profiling.
Herbst A, McIlwain S, Schmidt JJ, Aiken JM, Page CD, Li L. Herbst A, et al. Among authors: mcilwain s. J Proteome Res. 2009 Feb;8(2):1030-6. doi: 10.1021/pr800832s. J Proteome Res. 2009. PMID: 19133784 Free PMC article.
MASH Explorer: A Universal Software Environment for Top-Down Proteomics.
Wu Z, Roberts DS, Melby JA, Wenger K, Wetzel M, Gu Y, Ramanathan SG, Bayne EF, Liu X, Sun R, Ong IM, McIlwain SJ, Ge Y. Wu Z, et al. Among authors: mcilwain sj. J Proteome Res. 2020 Sep 4;19(9):3867-3876. doi: 10.1021/acs.jproteome.0c00469. Epub 2020 Aug 24. J Proteome Res. 2020. PMID: 32786689 Free PMC article.
Functionally Integrated Top-Down Proteomics for Standardized Assessment of Human Induced Pluripotent Stem Cell-Derived Engineered Cardiac Tissues.
Melby JA, de Lange WJ, Zhang J, Roberts DS, Mitchell SD, Tucholski T, Kim G, Kyrvasilis A, McIlwain SJ, Kamp TJ, Ralphe JC, Ge Y. Melby JA, et al. Among authors: mcilwain sj. J Proteome Res. 2021 Feb 5;20(2):1424-1433. doi: 10.1021/acs.jproteome.0c00830. Epub 2021 Jan 4. J Proteome Res. 2021. PMID: 33395532 Free PMC article.
54 results