Benevides JM - Search Results

1

A structural model for the single-stranded DNA genome of filamentous bacteriophage Pf1.

Tsuboi M, Tsunoda M, Overman SA, Benevides JM, Thomas GJ Jr. Tsuboi M, et al. Among authors: benevides jm. Biochemistry. 2010 Mar 2;49(8):1737-43. doi: 10.1021/bi901323a. Biochemistry. 2010. PMID: 20078135 Free PMC article.

2

Structural details of the thermophilic filamentous bacteriophage PH75 determined by polarized Raman microspectroscopy.

Tsuboi M, Benevides JM, Bondre P, Thomas GJ Jr. Tsuboi M, et al. Among authors: benevides jm. Biochemistry. 2005 Mar 29;44(12):4861-9. doi: 10.1021/bi0479306. Biochemistry. 2005. PMID: 15779912

3

Differences in secondary structure between packaged and unpackaged single-stranded DNA of bacteriophage phi X174 determined by Raman spectroscopy: a model for phi X174 DNA packaging.

Benevides JM, Stow PL, Ilag LL, Incardona NL, Thomas GJ Jr. Benevides JM, et al. Biochemistry. 1991 May 21;30(20):4855-63. doi: 10.1021/bi00234a004. Biochemistry. 1991. PMID: 1827990

4

Orientations of Tyr 21 and Tyr 24 in the capsid of filamentous virus Ff determined by polarized Raman spectroscopy.

Tsuboi M, Ushizawa K, Nakamura K, Benevides JM, Overman SA, Thomas GJ Jr. Tsuboi M, et al. Among authors: benevides jm. Biochemistry. 2001 Feb 6;40(5):1238-47. doi: 10.1021/bi001936n. Biochemistry. 2001. PMID: 11170449

5

DNA secondary structure and Raman markers of supercoiling in Escherichia coli plasmid pUC19.

Serban D, Benevides JM, Thomas GJ Jr. Serban D, et al. Among authors: benevides jm. Biochemistry. 2002 Jan 22;41(3):847-53. doi: 10.1021/bi011004z. Biochemistry. 2002. PMID: 11790106

6

Characterization of subunit-specific interactions in a double-stranded RNA virus: Raman difference spectroscopy of the phi6 procapsid.

Benevides JM, Juuti JT, Tuma R, Bamford DH, Thomas GJ Jr. Benevides JM, et al. Biochemistry. 2002 Oct 8;41(40):11946-53. doi: 10.1021/bi0201623. Biochemistry. 2002. PMID: 12356294

7

HU protein employs similar mechanisms of minor-groove recognition in binding to different B-DNA sites: demonstration by Raman spectroscopy.

Serban D, Benevides JM, Thomas GJ Jr. Serban D, et al. Among authors: benevides jm. Biochemistry. 2003 Jun 24;42(24):7390-9. doi: 10.1021/bi030050r. Biochemistry. 2003. PMID: 12809494

8

Domain structures and roles in bacteriophage HK97 capsid assembly and maturation.

Benevides JM, Bondre P, Duda RL, Hendrix RW, Thomas GJ Jr. Benevides JM, et al. Biochemistry. 2004 May 11;43(18):5428-36. doi: 10.1021/bi0302494. Biochemistry. 2004. PMID: 15122908

9

Local conformational changes induced in B-DNA by ethidium intercalation.

Benevides JM, Thomas GJ Jr. Benevides JM, et al. Biochemistry. 2005 Mar 1;44(8):2993-9. doi: 10.1021/bi048651l. Biochemistry. 2005. PMID: 15723542

10

Structural perturbations induced in linear and circular DNA by the architectural protein HU from Bacillus stearothermophilus.

Benevides JM, Serban D, Thomas GJ Jr. Benevides JM, et al. Biochemistry. 2006 Apr 25;45(16):5359-66. doi: 10.1021/bi0523557. Biochemistry. 2006. PMID: 16618125

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