Carstens RP - Search Results

1

The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events.

Warzecha CC, Shen S, Xing Y, Carstens RP. Warzecha CC, et al. Among authors: carstens rp. RNA Biol. 2009 Nov-Dec;6(5):546-62. doi: 10.4161/rna.6.5.9606. Epub 2009 Nov 22. RNA Biol. 2009. PMID: 19829082 Free PMC article.

2

A novel intronic cis element, ISE/ISS-3, regulates rat fibroblast growth factor receptor 2 splicing through activation of an upstream exon and repression of a downstream exon containing a noncanonical branch point sequence.

Hovhannisyan RH, Carstens RP. Hovhannisyan RH, et al. Among authors: carstens rp. Mol Cell Biol. 2005 Jan;25(1):250-63. doi: 10.1128/MCB.25.1.250-263.2005. Mol Cell Biol. 2005. PMID: 15601847 Free PMC article.

3

Characterization of sequences and mechanisms through which ISE/ISS-3 regulates FGFR2 splicing.

Hovhannisyan RH, Warzecha CC, Carstens RP. Hovhannisyan RH, et al. Among authors: carstens rp. Nucleic Acids Res. 2006 Jan 12;34(1):373-85. doi: 10.1093/nar/gkj407. Print 2006. Nucleic Acids Res. 2006. PMID: 16410617 Free PMC article.

4

Identification of RNA-binding proteins that regulate FGFR2 splicing through the use of sensitive and specific dual color fluorescence minigene assays.

Newman EA, Muh SJ, Hovhannisyan RH, Warzecha CC, Jones RB, McKeehan WL, Carstens RP. Newman EA, et al. Among authors: carstens rp. RNA. 2006 Jun;12(6):1129-41. doi: 10.1261/rna.34906. Epub 2006 Apr 7. RNA. 2006. PMID: 16603716 Free PMC article.

5

Heterogeneous ribonucleoprotein m is a splicing regulatory protein that can enhance or silence splicing of alternatively spliced exons.

Hovhannisyan RH, Carstens RP. Hovhannisyan RH, et al. Among authors: carstens rp. J Biol Chem. 2007 Dec 14;282(50):36265-74. doi: 10.1074/jbc.M704188200. Epub 2007 Oct 24. J Biol Chem. 2007. PMID: 17959601 Free article.

6

ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.

Warzecha CC, Sato TK, Nabet B, Hogenesch JB, Carstens RP. Warzecha CC, et al. Among authors: carstens rp. Mol Cell. 2009 Mar 13;33(5):591-601. doi: 10.1016/j.molcel.2009.01.025. Mol Cell. 2009. PMID: 19285943 Free PMC article.

7

MADS+: discovery of differential splicing events from Affymetrix exon junction array data.

Shen S, Warzecha CC, Carstens RP, Xing Y. Shen S, et al. Among authors: carstens rp. Bioinformatics. 2010 Jan 15;26(2):268-9. doi: 10.1093/bioinformatics/btp643. Epub 2009 Nov 17. Bioinformatics. 2010. PMID: 19933160 Free PMC article.

8

An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition.

Warzecha CC, Jiang P, Amirikian K, Dittmar KA, Lu H, Shen S, Guo W, Xing Y, Carstens RP. Warzecha CC, et al. Among authors: carstens rp. EMBO J. 2010 Oct 6;29(19):3286-300. doi: 10.1038/emboj.2010.195. Epub 2010 Aug 13. EMBO J. 2010. PMID: 20711167 Free PMC article.

9

MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data.

Shen S, Park JW, Huang J, Dittmar KA, Lu ZX, Zhou Q, Carstens RP, Xing Y. Shen S, et al. Among authors: carstens rp. Nucleic Acids Res. 2012 Apr;40(8):e61. doi: 10.1093/nar/gkr1291. Epub 2012 Jan 20. Nucleic Acids Res. 2012. PMID: 22266656 Free PMC article.

10

Genome-wide determination of a broad ESRP-regulated posttranscriptional network by high-throughput sequencing.

Dittmar KA, Jiang P, Park JW, Amirikian K, Wan J, Shen S, Xing Y, Carstens RP. Dittmar KA, et al. Among authors: carstens rp. Mol Cell Biol. 2012 Apr;32(8):1468-82. doi: 10.1128/MCB.06536-11. Epub 2012 Feb 21. Mol Cell Biol. 2012. PMID: 22354987 Free PMC article.

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