Gunawardena J - Search Results

1

The rational parameterization theorem for multisite post-translational modification systems.

Thomson M, Gunawardena J. Thomson M, et al. Among authors: gunawardena j. J Theor Biol. 2009 Dec 21;261(4):626-36. doi: 10.1016/j.jtbi.2009.09.003. Epub 2009 Sep 16. J Theor Biol. 2009. PMID: 19765594 Free PMC article.

2

The Hill function is the universal Hopfield barrier for sharpness of input-output responses.

Martinez-Corral R, Nam KM, DePace AH, Gunawardena J. Martinez-Corral R, et al. Among authors: gunawardena j. bioRxiv [Preprint]. 2024 Mar 28:2024.03.27.587054. doi: 10.1101/2024.03.27.587054. bioRxiv. 2024. Update in: Proc Natl Acad Sci U S A. 2024 May 28;121(22):e2318329121. doi: 10.1073/pnas.2318329121 PMID: 38585761 Free PMC article. Updated. Preprint.

3

Emergence of activation or repression in transcriptional control under a fixed molecular context.

Martinez-Corral R, Friedrich D, Frömel R, Velten L, Gunawardena J, DePace AH. Martinez-Corral R, et al. Among authors: gunawardena j. bioRxiv [Preprint]. 2024 Jun 2:2024.05.29.596388. doi: 10.1101/2024.05.29.596388. bioRxiv. 2024. PMID: 38854049 Free PMC article. Preprint.

4

Programming with models: modularity and abstraction provide powerful capabilities for systems biology.

Mallavarapu A, Thomson M, Ullian B, Gunawardena J. Mallavarapu A, et al. Among authors: gunawardena j. J R Soc Interface. 2009 Mar 6;6(32):257-70. doi: 10.1098/rsif.2008.0205. J R Soc Interface. 2009. PMID: 18647734 Free PMC article.

5

The geometry of multisite phosphorylation.

Manrai AK, Gunawardena J. Manrai AK, et al. Among authors: gunawardena j. Biophys J. 2008 Dec 15;95(12):5533-43. doi: 10.1529/biophysj.108.140632. Epub 2008 Oct 10. Biophys J. 2008. PMID: 18849417 Free PMC article.

6

Unlimited multistability in multisite phosphorylation systems.

Thomson M, Gunawardena J. Thomson M, et al. Among authors: gunawardena j. Nature. 2009 Jul 9;460(7252):274-7. doi: 10.1038/nature08102. Epub 2009 Jun 17. Nature. 2009. PMID: 19536158 Free PMC article.

7

Complex-linear invariants of biochemical networks.

Karp RL, Pérez Millán M, Dasgupta T, Dickenstein A, Gunawardena J. Karp RL, et al. Among authors: gunawardena j. J Theor Biol. 2012 Oct 21;311:130-8. doi: 10.1016/j.jtbi.2012.07.004. Epub 2012 Jul 16. J Theor Biol. 2012. PMID: 22814477

8

Realistic enzymology for post-translational modification: zero-order ultrasensitivity revisited.

Xu Y, Gunawardena J. Xu Y, et al. Among authors: gunawardena j. J Theor Biol. 2012 Oct 21;311:139-52. doi: 10.1016/j.jtbi.2012.07.012. Epub 2012 Jul 22. J Theor Biol. 2012. PMID: 22828569 Free PMC article.

9

Post-translational modification: nature's escape from genetic imprisonment and the basis for dynamic information encoding.

Prabakaran S, Lippens G, Steen H, Gunawardena J. Prabakaran S, et al. Among authors: gunawardena j. Wiley Interdiscip Rev Syst Biol Med. 2012 Nov-Dec;4(6):565-83. doi: 10.1002/wsbm.1185. Epub 2012 Aug 15. Wiley Interdiscip Rev Syst Biol Med. 2012. PMID: 22899623 Free PMC article. Review.

10

Time-scale separation--Michaelis and Menten's old idea, still bearing fruit.

Gunawardena J. Gunawardena J. FEBS J. 2014 Jan;281(2):473-88. doi: 10.1111/febs.12532. Epub 2013 Oct 17. FEBS J. 2014. PMID: 24103070 Free PMC article. Review.

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