Donald BR - Search Results

1

High-resolution protein structure determination starting with a global fold calculated from exact solutions to the RDC equations.

Zeng J, Boyles J, Tripathy C, Wang L, Yan A, Zhou P, Donald BR. Zeng J, et al. Among authors: donald br. J Biomol NMR. 2009 Nov;45(3):265-81. doi: 10.1007/s10858-009-9366-3. Epub 2009 Aug 27. J Biomol NMR. 2009. PMID: 19711185 Free PMC article.

2

Phase-independent rhythmic analysis of genome-wide expression patterns.

Langmead CJ, Yan AK, McClung CR, Donald BR. Langmead CJ, et al. Among authors: donald br. J Comput Biol. 2003;10(3-4):521-36. doi: 10.1089/10665270360688165. J Comput Biol. 2003. PMID: 12935342

3

An expectation/maximization nuclear vector replacement algorithm for automated NMR resonance assignments.

Langmead CJ, Donald BR. Langmead CJ, et al. Among authors: donald br. J Biomol NMR. 2004 Jun;29(2):111-38. doi: 10.1023/B:JNMR.0000019247.89110.e6. J Biomol NMR. 2004. PMID: 15014227

4

Exact solutions for internuclear vectors and backbone dihedral angles from NH residual dipolar couplings in two media, and their application in a systematic search algorithm for determining protein backbone structure.

Wang L, Donald BR. Wang L, et al. Among authors: donald br. J Biomol NMR. 2004 Jul;29(3):223-42. doi: 10.1023/B:JNMR.0000032552.69386.ea. J Biomol NMR. 2004. PMID: 15213422

5

A polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.

Langmead CJ, Yan A, Lilien R, Wang L, Donald BR. Langmead CJ, et al. Among authors: donald br. J Comput Biol. 2004;11(2-3):277-98. doi: 10.1089/1066527041410436. J Comput Biol. 2004. PMID: 15285893

6

An efficient and accurate algorithm for assigning nuclear overhauser effect restraints using a rotamer library ensemble and residual dipolar couplings.

Wang L, Donald BR. Wang L, et al. Among authors: donald br. Proc IEEE Comput Syst Bioinform Conf. 2005:189-202. doi: 10.1109/csb.2005.13. Proc IEEE Comput Syst Bioinform Conf. 2005. PMID: 16447976

7

An algebraic geometry approach to protein structure determination from NMR data.

Wang L, Mettu RR, Donald BR. Wang L, et al. Among authors: donald br. Proc IEEE Comput Syst Bioinform Conf. 2005:235-46. doi: 10.1109/csb.2005.11. Proc IEEE Comput Syst Bioinform Conf. 2005. PMID: 16447981

8

Analysis of a systematic search-based algorithm for determining protein backbone structure from a minimum number of residual dipolar couplings.

Wang L, Donald BR. Wang L, et al. Among authors: donald br. Proc IEEE Comput Syst Bioinform Conf. 2004:319-30. doi: 10.1109/csb.2004.1332445. Proc IEEE Comput Syst Bioinform Conf. 2004. PMID: 16448025

9

Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing.

Potluri S, Yan AK, Chou JJ, Donald BR, Bailey-Kellogg C. Potluri S, et al. Among authors: donald br. Proteins. 2006 Oct 1;65(1):203-19. doi: 10.1002/prot.21091. Proteins. 2006. PMID: 16897780

10

A polynomial-time algorithm for de novo protein backbone structure determination from nuclear magnetic resonance data.

Wang L, Mettu RR, Donald BR. Wang L, et al. Among authors: donald br. J Comput Biol. 2006 Sep;13(7):1267-88. doi: 10.1089/cmb.2006.13.1267. J Comput Biol. 2006. PMID: 17037958

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