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Methods for interpreting lists of affected genes obtained in a DNA microarray experiment.
Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M, Conley LN, SanCristobal M, Ferrari F, Garrido JJ, Groenen MA, Hornshøj H, Hulsegge I, Jiang L, Jiménez-Marín Á, Kommadath A, Lagarrigue S, Leunissen JA, Liaubet L, Neerincx PB, Nie H, Poel JV, Prickett D, Ramirez-Boo M, Rebel JM, Robert-Granié C, Skarman A, Smits MA, Sørensen P, Tosser-Klopp G, Watson M. Hedegaard J, et al. Among authors: leunissen ja. BMC Proc. 2009 Jul 16;3 Suppl 4(Suppl 4):S5. doi: 10.1186/1753-6561-3-s4-s5. BMC Proc. 2009. PMID: 19615118 Free PMC article.
Microarray data mining using Bioconductor packages.
Nie H, Neerincx PB, van der Poel J, Ferrari F, Bicciato S, Leunissen JA, Groenen MA. Nie H, et al. Among authors: leunissen ja. BMC Proc. 2009 Jul 16;3 Suppl 4(Suppl 4):S9. doi: 10.1186/1753-6561-3-S4-S9. BMC Proc. 2009. PMID: 19615122 Free PMC article.
Evolution of web services in bioinformatics.
Neerincx PB, Leunissen JA. Neerincx PB, et al. Among authors: leunissen ja. Brief Bioinform. 2005 Jun;6(2):178-88. doi: 10.1093/bib/6.2.178. Brief Bioinform. 2005. PMID: 15975226 Review.
Using R in Taverna: RShell v1.2.
Wassink I, Rauwerda H, Neerincx PB, van der Vet PE, Breit TM, Leunissen JA, Nijholt A. Wassink I, et al. Among authors: leunissen ja. BMC Res Notes. 2009 Jul 16;2:138. doi: 10.1186/1756-0500-2-138. BMC Res Notes. 2009. PMID: 19607662 Free PMC article.
Interoperability with Moby 1.0--it's better than sharing your toothbrush!
BioMoby Consortium; Wilkinson MD, Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D, Saiz Ede A, Wang D, Gibbons F, Gordon PM, Sensen CW, Carrasco JM, Fernández JM, Shen L, Links M, Ng M, Opushneva N, Neerincx PB, Leunissen JA, Ernst R, Twigger S, Usadel B, Good B, Wong Y, Stein L, Crosby W, Karlsson J, Royo R, Párraga I, Ramírez S, Gelpi JL, Trelles O, Pisano DG, Jimenez N, Kerhornou A, Rosset R, Zamacola L, Tarraga J, Huerta-Cepas J, Carazo JM, Dopazo J, Guigo R, Navarro A, Orozco M, Valencia A, Claros MG, Pérez AJ, Aldana J, Rojano M, Fernandez-Santa Cruz R, Navas I, Schiltz G, Farmer A, Gessler D, Schoof H, Groscurth A. BioMoby Consortium, et al. Among authors: leunissen ja. Brief Bioinform. 2008 May;9(3):220-31. doi: 10.1093/bib/bbn003. Epub 2008 Jan 31. Brief Bioinform. 2008. PMID: 18238804 Review.
MADMAX - Management and analysis database for multiple ~omics experiments.
Lin K, Kools H, de Groot PJ, Gavai AK, Basnet RK, Cheng F, Wu J, Wang X, Lommen A, Hooiveld GJ, Bonnema G, Visser RG, Muller MR, Leunissen JA. Lin K, et al. Among authors: leunissen ja. J Integr Bioinform. 2011 Jul 21;8(2):160. doi: 10.2390/biecoll-jib-2011-160. J Integr Bioinform. 2011. PMID: 21778530 Free article.
90 results