Kossida S - Search Results

1

Human microRNA target analysis and gene ontology clustering by GOmir, a novel stand-alone application.

Roubelakis MG, Zotos P, Papachristoudis G, Michalopoulos I, Pappa KI, Anagnou NP, Kossida S. Roubelakis MG, et al. Among authors: kossida s. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S20. doi: 10.1186/1471-2105-10-S6-S20. BMC Bioinformatics. 2009. PMID: 19534746 Free PMC article.

2

Web-based tools for protein classification.

Paliakasis CD, Michalopoulos I, Kossida S. Paliakasis CD, et al. Among authors: kossida s. Methods Mol Biol. 2008;428:349-67. doi: 10.1007/978-1-59745-117-8_18. Methods Mol Biol. 2008. PMID: 18287782

3

GIBA: a clustering tool for detecting protein complexes.

Moschopoulos CN, Pavlopoulos GA, Schneider R, Likothanassis SD, Kossida S. Moschopoulos CN, et al. Among authors: kossida s. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S11. doi: 10.1186/1471-2105-10-S6-S11. BMC Bioinformatics. 2009. PMID: 19534736 Free PMC article.

4

Analysis of secreted proteins for the study of bladder cancer cell aggressiveness.

Makridakis M, Roubelakis MG, Bitsika V, Dimuccio V, Samiotaki M, Kossida S, Panayotou G, Coleman J, Candiano G, Anagnou NP, Vlahou A. Makridakis M, et al. Among authors: kossida s. J Proteome Res. 2010 Jun 4;9(6):3243-59. doi: 10.1021/pr100189d. J Proteome Res. 2010. PMID: 20423150

5

Sp1 binds to the external promoter of the p73 gene and induces the expression of TAp73gamma in lung cancer.

Logotheti S, Michalopoulos I, Sideridou M, Daskalos A, Kossida S, Spandidos DA, Field JK, Vojtesek B, Liloglou T, Gorgoulis V, Zoumpourlis V. Logotheti S, et al. Among authors: kossida s. FEBS J. 2010 Jul;277(14):3014-27. doi: 10.1111/j.1742-4658.2010.07710.x. Epub 2010 Jun 7. FEBS J. 2010. PMID: 20528922 Free article.

6

Noise reduction in protein-protein interaction graphs by the implementation of a novel weighting scheme.

Kritikos GD, Moschopoulos C, Vazirgiannis M, Kossida S. Kritikos GD, et al. Among authors: kossida s. BMC Bioinformatics. 2011 Jun 16;12:239. doi: 10.1186/1471-2105-12-239. BMC Bioinformatics. 2011. PMID: 21679454 Free PMC article.

7

Human gene correlation analysis (HGCA): a tool for the identification of transcriptionally co-expressed genes.

Michalopoulos I, Pavlopoulos GA, Malatras A, Karelas A, Kostadima MA, Schneider R, Kossida S. Michalopoulos I, et al. Among authors: kossida s. BMC Res Notes. 2012 Jun 6;5:265. doi: 10.1186/1756-0500-5-265. BMC Res Notes. 2012. PMID: 22672625 Free PMC article.

8

Antiviral Stratagems Against HIV-1 Using RNA Interference (RNAi) Technology.

Vlachakis D, Tsiliki G, Pavlopoulou A, Roubelakis MG, Tsaniras SC, Kossida S. Vlachakis D, et al. Among authors: kossida s. Evol Bioinform Online. 2013 May 16;9:203-13. doi: 10.4137/EBO.S11412. Print 2013. Evol Bioinform Online. 2013. PMID: 23761954 Free PMC article.

9

Gene fusion analysis in the battle against the African endemic sleeping sickness.

Trimpalis P, Koumandou VL, Pliakou E, Anagnou NP, Kossida S. Trimpalis P, et al. Among authors: kossida s. PLoS One. 2013 Jul 17;8(7):e68854. doi: 10.1371/journal.pone.0068854. Print 2013. PLoS One. 2013. PMID: 23874788 Free PMC article.

10

3D molecular modeling and evolutionary study of the Trypanosoma brucei DNA Topoisomerase IB, as a new emerging pharmacological target.

Vlachakis D, Pavlopoulou A, Roubelakis MG, Feidakis C, Anagnou NP, Kossida S. Vlachakis D, et al. Among authors: kossida s. Genomics. 2014 Jan;103(1):107-13. doi: 10.1016/j.ygeno.2013.11.008. Epub 2013 Dec 5. Genomics. 2014. PMID: 24316217 Free article.

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