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Page 1
Mapping microhabitats of lignocellulose decomposition by a microbial consortium.
Veličković M, Wu R, Gao Y, Thairu MW, Veličković D, Munoz N, Clendinen CS, Bilbao A, Chu RK, Lalli PM, Zemaitis K, Nicora CD, Kyle JE, Orton D, Williams S, Zhu Y, Zhao R, Monroe ME, Moore RJ, Webb-Robertson BM, Bramer LM, Currie CR, Piehowski PD, Burnum-Johnson KE. Veličković M, et al. Among authors: piehowski pd. Nat Chem Biol. 2024 Aug;20(8):1033-1043. doi: 10.1038/s41589-023-01536-7. Epub 2024 Feb 1. Nat Chem Biol. 2024. PMID: 38302607 Free PMC article.
Targeting CCL2/CCR2 Signaling Overcomes MEK Inhibitor Resistance in Acute Myeloid Leukemia.
Modak RV, de Oliveira Rebola KG, McClatchy J, Mohammadhosseini M, Damnernsawad A, Kurtz SE, Eide CA, Wu G, Laderas T, Nechiporuk T, Gritsenko MA, Hansen JR, Hutchinson C, Gosline SJC, Piehowski P, Bottomly D, Short N, Rodland K, McWeeney SK, Tyner JW, Agarwal A. Modak RV, et al. Clin Cancer Res. 2024 May 15;30(10):2245-2259. doi: 10.1158/1078-0432.CCR-23-2654. Clin Cancer Res. 2024. PMID: 38451486 Free PMC article.
Sexual dimorphism and the multi-omic response to exercise training in rat subcutaneous white adipose tissue.
Many GM, Sanford JA, Sagendorf TJ, Hou Z, Nigro P, Whytock KL, Amar D, Caputo T, Gay NR, Gaul DA, Hirshman MF, Jimenez-Morales D, Lindholm ME, Muehlbauer MJ, Vamvini M, Bergman BC, Fernández FM, Goodyear LJ, Hevener AL, Ortlund EA, Sparks LM, Xia A, Adkins JN, Bodine SC, Newgard CB, Schenk S; MoTrPAC Study Group. Many GM, et al. Nat Metab. 2024 May;6(5):963-979. doi: 10.1038/s42255-023-00959-9. Epub 2024 May 1. Nat Metab. 2024. PMID: 38693320 Free PMC article.
Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment.
Veličković M, Fillmore TL, Attah K, Posso C, Pino JC, Zhao R, Williams SM, Veličković D, Jacobs JM, Burnum-Johnson KE, Zhu Y, Piehowski PD. Veličković M, et al. Among authors: piehowski pd. bioRxiv [Preprint]. 2023 Mar 13:2023.03.13.531822. doi: 10.1101/2023.03.13.531822. bioRxiv. 2023. Update in: Anal Chem. 2024 Aug 13;96(32):12973-12982. doi: 10.1021/acs.analchem.4c00523 PMID: 36993277 Free PMC article. Updated. Preprint.
Mapping the proteogenomic landscape enables prediction of drug response in acute myeloid leukemia.
Pino JC, Posso C, Joshi SK, Nestor M, Moon J, Hansen JR, Hutchinson-Bunch C, Gritsenko MA, Weitz KK, Watanabe-Smith K, Long N, McDermott JE, Druker BJ, Liu T, Tyner JW, Agarwal A, Traer E, Piehowski PD, Tognon CE, Rodland KD, Gosline SJC. Pino JC, et al. Among authors: piehowski pd. Cell Rep Med. 2024 Jan 16;5(1):101359. doi: 10.1016/j.xcrm.2023.101359. Cell Rep Med. 2024. PMID: 38232702 Free PMC article.
Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.
Hu B, Canon S, Eloe-Fadrosh EA, Anubhav, Babinski M, Corilo Y, Davenport K, Duncan WD, Fagnan K, Flynn M, Foster B, Hays D, Huntemann M, Jackson EKP, Kelliher J, Li PE, Lo CC, Mans D, McCue LA, Mouncey N, Mungall CJ, Piehowski PD, Purvine SO, Smith M, Varghese NJ, Winston D, Xu Y, Chain PSG. Hu B, et al. Among authors: piehowski pd. Front Bioinform. 2022 Jan 17;1:826370. doi: 10.3389/fbinf.2021.826370. eCollection 2021. Front Bioinform. 2022. PMID: 36303775 Free PMC article. Review.
Soluble ACE2 Is Filtered into the Urine.
Nelson JW, Ortiz-Melo DI, Mattocks NK, Emathinger JM, Prescott J, Xu K, Griffiths RC, Wakasaki R, Piehowski PD, Hutchens MP, Coffman TM, Gurley SB. Nelson JW, et al. Among authors: piehowski pd. Kidney360. 2022 Aug 9;3(12):2086-2094. doi: 10.34067/KID.0001622022. eCollection 2022 Dec 29. Kidney360. 2022. PMID: 36591353 Free PMC article.
Proteome Mapping of the Human Pancreatic Islet Microenvironment Reveals Endocrine-Exocrine Signaling Sphere of Influence.
Gosline SJC, Veličković M, Pino JC, Day LZ, Attah IK, Swensen AC, Danna V, Posso C, Rodland KD, Chen J, Matthews CE, Campbell-Thompson M, Laskin J, Burnum-Johnson K, Zhu Y, Piehowski PD. Gosline SJC, et al. Among authors: piehowski pd. Mol Cell Proteomics. 2023 Aug;22(8):100592. doi: 10.1016/j.mcpro.2023.100592. Epub 2023 Jun 15. Mol Cell Proteomics. 2023. PMID: 37328065 Free PMC article.
Robust collection and processing for label-free single voxel proteomics.
Kitata RB, Velickovic M, Xu Z, Zhao R, Scholten D, Chu RK, Orton DJ, Chrisler WB, Mathews JV, Piehowski PD, Liu T, Smith RD, Liu H, Wasserfall CH, Tsai CF, Shi T. Kitata RB, et al. Among authors: piehowski pd. bioRxiv [Preprint]. 2023 Aug 15:2023.08.14.553333. doi: 10.1101/2023.08.14.553333. bioRxiv. 2023. Update in: Nat Commun. 2025 Jan 13;16(1):547. doi: 10.1038/s41467-024-54643-x PMID: 37645907 Free PMC article. Updated. Preprint.
100 results