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Page 1
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens.
Silby MW, Cerdeño-Tárraga AM, Vernikos GS, Giddens SR, Jackson RW, Preston GM, Zhang XX, Moon CD, Gehrig SM, Godfrey SA, Knight CG, Malone JG, Robinson Z, Spiers AJ, Harris S, Challis GL, Yaxley AM, Harris D, Seeger K, Murphy L, Rutter S, Squares R, Quail MA, Saunders E, Mavromatis K, Brettin TS, Bentley SD, Hothersall J, Stephens E, Thomas CM, Parkhill J, Levy SB, Rainey PB, Thomson NR. Silby MW, et al. Among authors: harris d, harris s. Genome Biol. 2009;10(5):R51. doi: 10.1186/gb-2009-10-5-r51. Epub 2009 May 11. Genome Biol. 2009. PMID: 19432983 Free PMC article.
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa.
Winstanley C, Langille MG, Fothergill JL, Kukavica-Ibrulj I, Paradis-Bleau C, Sanschagrin F, Thomson NR, Winsor GL, Quail MA, Lennard N, Bignell A, Clarke L, Seeger K, Saunders D, Harris D, Parkhill J, Hancock RE, Brinkman FS, Levesque RC. Winstanley C, et al. Among authors: harris d. Genome Res. 2009 Jan;19(1):12-23. doi: 10.1101/gr.086082.108. Epub 2008 Dec 1. Genome Res. 2009. PMID: 19047519 Free PMC article.
Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet.
Tett A, Spiers AJ, Crossman LC, Ager D, Ciric L, Dow JM, Fry JC, Harris D, Lilley A, Oliver A, Parkhill J, Quail MA, Rainey PB, Saunders NJ, Seeger K, Snyder LA, Squares R, Thomas CM, Turner SL, Zhang XX, Field D, Bailey MJ. Tett A, et al. Among authors: harris d. ISME J. 2007 Aug;1(4):331-40. doi: 10.1038/ismej.2007.47. Epub 2007 Jul 5. ISME J. 2007. PMID: 18043644 Free PMC article.
The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants.
Crossman LC, Gould VC, Dow JM, Vernikos GS, Okazaki A, Sebaihia M, Saunders D, Arrowsmith C, Carver T, Peters N, Adlem E, Kerhornou A, Lord A, Murphy L, Seeger K, Squares R, Rutter S, Quail MA, Rajandream MA, Harris D, Churcher C, Bentley SD, Parkhill J, Thomson NR, Avison MB. Crossman LC, et al. Among authors: harris d. Genome Biol. 2008 Apr 17;9(4):R74. doi: 10.1186/gb-2008-9-4-r74. Genome Biol. 2008. PMID: 18419807 Free PMC article.
Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii.
Khan A, Böhme U, Kelly KA, Adlem E, Brooks K, Simmonds M, Mungall K, Quail MA, Arrowsmith C, Chillingworth T, Churcher C, Harris D, Collins M, Fosker N, Fraser A, Hance Z, Jagels K, Moule S, Murphy L, O'Neil S, Rajandream MA, Saunders D, Seeger K, Whitehead S, Mayr T, Xuan X, Watanabe J, Suzuki Y, Wakaguri H, Sugano S, Sugimoto C, Paulsen I, Mackey AJ, Roos DS, Hall N, Berriman M, Barrell B, Sibley LD, Ajioka JW. Khan A, et al. Among authors: harris d. Genome Res. 2006 Sep;16(9):1119-25. doi: 10.1101/gr.5318106. Epub 2006 Aug 10. Genome Res. 2006. PMID: 16902086 Free PMC article.
Gene arrays at Pneumocystis carinii telomeres.
Keely SP, Renauld H, Wakefield AE, Cushion MT, Smulian AG, Fosker N, Fraser A, Harris D, Murphy L, Price C, Quail MA, Seeger K, Sharp S, Tindal CJ, Warren T, Zuiderwijk E, Barrell BG, Stringer JR, Hall N. Keely SP, et al. Among authors: harris d. Genetics. 2005 Aug;170(4):1589-600. doi: 10.1534/genetics.105.040733. Epub 2005 Jun 18. Genetics. 2005. PMID: 15965256 Free PMC article.
Sequencing bacterial artificial chromosomes.
Harris DE, Murphy L. Harris DE, et al. Methods Mol Biol. 2001;175:217-34. doi: 10.1385/1-59259-235-X:217. Methods Mol Biol. 2001. PMID: 11462837 Review. No abstract available.
Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction.
Sebaihia M, Preston A, Maskell DJ, Kuzmiak H, Connell TD, King ND, Orndorff PE, Miyamoto DM, Thomson NR, Harris D, Goble A, Lord A, Murphy L, Quail MA, Rutter S, Squares R, Squares S, Woodward J, Parkhill J, Temple LM. Sebaihia M, et al. Among authors: harris d. J Bacteriol. 2006 Aug;188(16):6002-15. doi: 10.1128/JB.01927-05. J Bacteriol. 2006. PMID: 16885469 Free PMC article.
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ. Parkhill J, et al. Among authors: harris b, harris de. Nat Genet. 2003 Sep;35(1):32-40. doi: 10.1038/ng1227. Epub 2003 Aug 10. Nat Genet. 2003. PMID: 12910271
4,433 results