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Page 1
Analysis of ten Brucella genomes reveals evidence for horizontal gene transfer despite a preferred intracellular lifestyle.
Wattam AR, Williams KP, Snyder EE, Almeida NF Jr, Shukla M, Dickerman AW, Crasta OR, Kenyon R, Lu J, Shallom JM, Yoo H, Ficht TA, Tsolis RM, Munk C, Tapia R, Han CS, Detter JC, Bruce D, Brettin TS, Sobral BW, Boyle SM, Setubal JC. Wattam AR, et al. Among authors: setubal jc. J Bacteriol. 2009 Jun;191(11):3569-79. doi: 10.1128/JB.01767-08. Epub 2009 Apr 3. J Bacteriol. 2009. PMID: 19346311 Free PMC article.
Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.
Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE Jr, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF Jr, Setubal JC, Kitajima JP. Van Sluys MA, et al. Among authors: setubal jc. J Bacteriol. 2003 Feb;185(3):1018-26. doi: 10.1128/JB.185.3.1018-1026.2003. J Bacteriol. 2003. PMID: 12533478 Free PMC article.
Comparative genomics analyses of citrus-associated bacteria.
Moreira LM, de Souza RF, Almeida NF Jr, Setubal JC, Oliveira JC, Furlan LR, Ferro JA, da Silva AC. Moreira LM, et al. Among authors: setubal jc. Annu Rev Phytopathol. 2004;42:163-84. doi: 10.1146/annurev.phyto.42.040803.140310. Annu Rev Phytopathol. 2004. PMID: 15283664 Review.
Developing bioinformatic resources for coronaviruses.
Baker SC, Jukneliene D, Purkayastha A, Snyder EE, Crasta OR, Czar MJ, Setubal JC, Sobral BW. Baker SC, et al. Among authors: setubal jc. Adv Exp Med Biol. 2006;581:395-8. doi: 10.1007/978-0-387-33012-9_70. Adv Exp Med Biol. 2006. PMID: 17037566 Free PMC article. Review. No abstract available.
PATRIC: the VBI PathoSystems Resource Integration Center.
Snyder EE, Kampanya N, Lu J, Nordberg EK, Karur HR, Shukla M, Soneja J, Tian Y, Xue T, Yoo H, Zhang F, Dharmanolla C, Dongre NV, Gillespie JJ, Hamelius J, Hance M, Huntington KI, Jukneliene D, Koziski J, Mackasmiel L, Mane SP, Nguyen V, Purkayastha A, Shallom J, Yu G, Guo Y, Gabbard J, Hix D, Azad AF, Baker SC, Boyle SM, Khudyakov Y, Meng XJ, Rupprecht C, Vinje J, Crasta OR, Czar MJ, Dickerman A, Eckart JD, Kenyon R, Will R, Setubal JC, Sobral BW. Snyder EE, et al. Among authors: setubal jc. Nucleic Acids Res. 2007 Jan;35(Database issue):D401-6. doi: 10.1093/nar/gkl858. Epub 2006 Nov 16. Nucleic Acids Res. 2007. PMID: 17142235 Free PMC article.
A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000.
Almeida NF, Yan S, Lindeberg M, Studholme DJ, Schneider DJ, Condon B, Liu H, Viana CJ, Warren A, Evans C, Kemen E, Maclean D, Angot A, Martin GB, Jones JD, Collmer A, Setubal JC, Vinatzer BA. Almeida NF, et al. Among authors: setubal jc. Mol Plant Microbe Interact. 2009 Jan;22(1):52-62. doi: 10.1094/MPMI-22-1-0052. Mol Plant Microbe Interact. 2009. PMID: 19061402 Free article.
Rickettsia phylogenomics: unwinding the intricacies of obligate intracellular life.
Gillespie JJ, Williams K, Shukla M, Snyder EE, Nordberg EK, Ceraul SM, Dharmanolla C, Rainey D, Soneja J, Shallom JM, Vishnubhat ND, Wattam R, Purkayastha A, Czar M, Crasta O, Setubal JC, Azad AF, Sobral BS. Gillespie JJ, et al. Among authors: setubal jc. PLoS One. 2008;3(4):e2018. doi: 10.1371/journal.pone.0002018. Epub 2008 Apr 16. PLoS One. 2008. PMID: 19194535 Free PMC article.
Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.
Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW. Slater SC, et al. Among authors: setubal jc. J Bacteriol. 2009 Apr;191(8):2501-11. doi: 10.1128/JB.01779-08. Epub 2009 Feb 27. J Bacteriol. 2009. PMID: 19251847 Free PMC article.
171 results