Ruppin E - Search Results

1

Toward accurate reconstruction of functional protein networks.

Yosef N, Ungar L, Zalckvar E, Kimchi A, Kupiec M, Ruppin E, Sharan R. Yosef N, et al. Among authors: ruppin e. Mol Syst Biol. 2009;5:248. doi: 10.1038/msb.2009.3. Epub 2009 Mar 17. Mol Syst Biol. 2009. PMID: 19293828 Free PMC article.

2

Quantitative analysis of genetic and neuronal multi-perturbation experiments.

Kaufman A, Keinan A, Meilijson I, Kupiec M, Ruppin E. Kaufman A, et al. Among authors: ruppin e. PLoS Comput Biol. 2005 Nov;1(6):e64. doi: 10.1371/journal.pcbi.0010064. Epub 2005 Nov 25. PLoS Comput Biol. 2005. PMID: 16322764 Free PMC article.

3

Multi-knockout genetic network analysis: the Rad6 example.

Kaufman A, Kupiec M, Ruppin E. Kaufman A, et al. Among authors: ruppin e. Proc IEEE Comput Syst Bioinform Conf. 2004:332-40. Proc IEEE Comput Syst Bioinform Conf. 2004. PMID: 16448026

4

QPath: a method for querying pathways in a protein-protein interaction network.

Shlomi T, Segal D, Ruppin E, Sharan R. Shlomi T, et al. Among authors: ruppin e. BMC Bioinformatics. 2006 Apr 10;7:199. doi: 10.1186/1471-2105-7-199. BMC Bioinformatics. 2006. PMID: 16606460 Free PMC article.

5

A direct comparison of protein interaction confidence assignment schemes.

Suthram S, Shlomi T, Ruppin E, Sharan R, Ideker T. Suthram S, et al. Among authors: ruppin e. BMC Bioinformatics. 2006 Jul 26;7:360. doi: 10.1186/1471-2105-7-360. BMC Bioinformatics. 2006. PMID: 16872496 Free PMC article.

6

Inferring functional pathways from multi-perturbation data.

Yosef N, Kaufman A, Ruppin E. Yosef N, et al. Among authors: ruppin e. Bioinformatics. 2006 Jul 15;22(14):e539-46. doi: 10.1093/bioinformatics/btl204. Bioinformatics. 2006. PMID: 16873518

7

Multiple knockout analysis of genetic robustness in the yeast metabolic network.

Deutscher D, Meilijson I, Kupiec M, Ruppin E. Deutscher D, et al. Among authors: ruppin e. Nat Genet. 2006 Sep;38(9):993-8. doi: 10.1038/ng1856. Nat Genet. 2006. PMID: 16941010

8

Epitope mapping using combinatorial phage-display libraries: a graph-based algorithm.

Mayrose I, Shlomi T, Rubinstein ND, Gershoni JM, Ruppin E, Sharan R, Pupko T. Mayrose I, et al. Among authors: ruppin e. Nucleic Acids Res. 2007;35(1):69-78. doi: 10.1093/nar/gkl975. Epub 2006 Dec 6. Nucleic Acids Res. 2007. PMID: 17151070 Free PMC article.

9

Gene loss rate: a probabilistic measure for the conservation of eukaryotic genes.

Borenstein E, Shlomi T, Ruppin E, Sharan R. Borenstein E, et al. Among authors: ruppin e. Nucleic Acids Res. 2007;35(1):e7. doi: 10.1093/nar/gkl792. Epub 2006 Dec 7. Nucleic Acids Res. 2007. PMID: 17158152 Free PMC article.

10

A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data.

Yosef N, Yakhini Z, Tsalenko A, Kristensen V, Børresen-Dale AL, Ruppin E, Sharan R. Yosef N, et al. Among authors: ruppin e. Bioinformatics. 2007 Jan 15;23(2):e91-8. doi: 10.1093/bioinformatics/btl298. Bioinformatics. 2007. PMID: 17237111

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