Ebbels TM - Search Results

1

Time-resolved metabolic footprinting for nonlinear modeling of bacterial substrate utilization.

Behrends V, Ebbels TM, Williams HD, Bundy JG. Behrends V, et al. Among authors: ebbels tm. Appl Environ Microbiol. 2009 Apr;75(8):2453-63. doi: 10.1128/AEM.01742-08. Epub 2009 Feb 13. Appl Environ Microbiol. 2009. PMID: 19218401 Free PMC article.

2

Single sample pathway analysis in metabolomics: performance evaluation and application.

Wieder C, Lai RPJ, Ebbels TMD. Wieder C, et al. Among authors: ebbels tmd. BMC Bioinformatics. 2022 Nov 14;23(1):481. doi: 10.1186/s12859-022-05005-1. BMC Bioinformatics. 2022. PMID: 36376837 Free PMC article.

3

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts.

Beckonert O, Keun HC, Ebbels TM, Bundy J, Holmes E, Lindon JC, Nicholson JK. Beckonert O, et al. Among authors: ebbels tm. Nat Protoc. 2007;2(11):2692-703. doi: 10.1038/nprot.2007.376. Nat Protoc. 2007. PMID: 18007604

4

Combining spectral ordering with peak fitting for one-dimensional NMR quantitative metabolomics.

Liebeke M, Hao J, Ebbels TM, Bundy JG. Liebeke M, et al. Among authors: ebbels tm. Anal Chem. 2013 May 7;85(9):4605-12. doi: 10.1021/ac400237w. Epub 2013 Apr 9. Anal Chem. 2013. PMID: 23521721

5

Bayesian deconvolution and quantification of metabolites in complex 1D NMR spectra using BATMAN.

Hao J, Liebeke M, Astle W, De Iorio M, Bundy JG, Ebbels TM. Hao J, et al. Among authors: ebbels tm. Nat Protoc. 2014;9(6):1416-27. doi: 10.1038/nprot.2014.090. Epub 2014 May 22. Nat Protoc. 2014. PMID: 24853927

6

Identifying biochemical phenotypic differences between cryptic species.

Liebeke M, Bruford MW, Donnelly RK, Ebbels TM, Hao J, Kille P, Lahive E, Madison RM, Morgan AJ, Pinto-Juma GA, Spurgeon DJ, Svendsen C, Bundy JG. Liebeke M, et al. Among authors: ebbels tm. Biol Lett. 2014 Sep;10(9):20140615. doi: 10.1098/rsbl.2014.0615. Biol Lett. 2014. PMID: 25252836 Free PMC article.

7

Statistical Correlations between NMR Spectroscopy and Direct Infusion FT-ICR Mass Spectrometry Aid Annotation of Unknowns in Metabolomics.

Hao J, Liebeke M, Sommer U, Viant MR, Bundy JG, Ebbels TM. Hao J, et al. Among authors: ebbels tm. Anal Chem. 2016 Mar 1;88(5):2583-9. doi: 10.1021/acs.analchem.5b02889. Epub 2016 Feb 10. Anal Chem. 2016. PMID: 26824414 Free article.

8

Modelling the acid/base ¹H NMR chemical shift limits of metabolites in human urine.

Tredwell GD, Bundy JG, De Iorio M, Ebbels TM. Tredwell GD, et al. Among authors: ebbels tm. Metabolomics. 2016;12(10):152. doi: 10.1007/s11306-016-1101-y. Epub 2016 Sep 15. Metabolomics. 2016. PMID: 27729829 Free PMC article.

9

Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis.

Wieder C, Frainay C, Poupin N, Rodríguez-Mier P, Vinson F, Cooke J, Lai RP, Bundy JG, Jourdan F, Ebbels T. Wieder C, et al. PLoS Comput Biol. 2021 Sep 7;17(9):e1009105. doi: 10.1371/journal.pcbi.1009105. eCollection 2021 Sep. PLoS Comput Biol. 2021. PMID: 34492007 Free PMC article.

10

Avoiding the Misuse of Pathway Analysis Tools in Environmental Metabolomics.

Wieder C, Bundy JG, Frainay C, Poupin N, Rodríguez-Mier P, Vinson F, Cooke J, Lai RPJ, Jourdan F, Ebbels TMD. Wieder C, et al. Among authors: ebbels tmd. Environ Sci Technol. 2022 Oct 18;56(20):14219-14222. doi: 10.1021/acs.est.2c05588. Epub 2022 Sep 26. Environ Sci Technol. 2022. PMID: 36162120 Free PMC article. No abstract available.

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