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Page 1
Outcome of a workshop on applications of protein models in biomedical research.
Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, Dunbrack RL Jr, Fidelis K, Fiser A, Godzik A, Huang YJ, Humblet C, Jacobson MP, Joachimiak A, Krystek SR Jr, Kortemme T, Kryshtafovych A, Montelione GT, Moult J, Murray D, Sanchez R, Sosnick TR, Standley DM, Stouch T, Vajda S, Vasquez M, Westbrook JD, Wilson IA. Schwede T, et al. Among authors: jacobson mp. Structure. 2009 Feb 13;17(2):151-9. doi: 10.1016/j.str.2008.12.014. Structure. 2009. PMID: 19217386 Free PMC article.
Prediction of side-chain conformations on protein surfaces.
Xiang Z, Steinbach PJ, Jacobson MP, Friesner RA, Honig B. Xiang Z, et al. Among authors: jacobson mp. Proteins. 2007 Mar 1;66(4):814-23. doi: 10.1002/prot.21099. Proteins. 2007. PMID: 17206724 Free PMC article.
Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies.
Pieper U, Chiang R, Seffernick JJ, Brown SD, Glasner ME, Kelly L, Eswar N, Sauder JM, Bonanno JB, Swaminathan S, Burley SK, Zheng X, Chance MR, Almo SC, Gerlt JA, Raushel FM, Jacobson MP, Babbitt PC, Sali A. Pieper U, et al. Among authors: jacobson mp. J Struct Funct Genomics. 2009 Apr;10(2):107-25. doi: 10.1007/s10969-008-9056-5. Epub 2009 Feb 14. J Struct Funct Genomics. 2009. PMID: 19219566 Free PMC article.
The Enzyme Function Initiative.
Gerlt JA, Allen KN, Almo SC, Armstrong RN, Babbitt PC, Cronan JE, Dunaway-Mariano D, Imker HJ, Jacobson MP, Minor W, Poulter CD, Raushel FM, Sali A, Shoichet BK, Sweedler JV. Gerlt JA, et al. Among authors: jacobson mp. Biochemistry. 2011 Nov 22;50(46):9950-62. doi: 10.1021/bi201312u. Epub 2011 Oct 26. Biochemistry. 2011. PMID: 21999478 Free PMC article. Review.
Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis.
Rakus JF, Kalyanaraman C, Fedorov AA, Fedorov EV, Mills-Groninger FP, Toro R, Bonanno J, Bain K, Sauder JM, Burley SK, Almo SC, Jacobson MP, Gerlt JA. Rakus JF, et al. Among authors: jacobson mp. Biochemistry. 2009 Dec 8;48(48):11546-58. doi: 10.1021/bi901731c. Biochemistry. 2009. PMID: 19883118 Free PMC article.
Prediction of substrates for glutathione transferases by covalent docking.
Dong GQ, Calhoun S, Fan H, Kalyanaraman C, Branch MC, Mashiyama ST, London N, Jacobson MP, Babbitt PC, Shoichet BK, Armstrong RN, Sali A. Dong GQ, et al. Among authors: jacobson mp. J Chem Inf Model. 2014 Jun 23;54(6):1687-99. doi: 10.1021/ci5001554. Epub 2014 May 16. J Chem Inf Model. 2014. PMID: 24802635 Free PMC article.
202 results