Gifford RJ - Search Results

1

Phylogenetic reconstruction of transmission events from individuals with acute HIV infection: toward more-rigorous epidemiological definitions.

Brown AE, Gifford RJ, Clewley JP, Kucherer C, Masquelier B, Porter K, Balotta C, Back NK, Jorgensen LB, de Mendoza C, Bhaskaran K, Gill ON, Johnson AM, Pillay D; Concerted Action on Seroconversion to AIDS and Death in Europe (CASCADE) Collaboration. Brown AE, et al. Among authors: gifford rj. J Infect Dis. 2009 Feb 1;199(3):427-31. doi: 10.1086/596049. J Infect Dis. 2009. PMID: 19133810

2

The impact of transmitted drug resistance on the natural history of HIV infection and response to first-line therapy.

Pillay D, Bhaskaran K, Jurriaans S, Prins M, Masquelier B, Dabis F, Gifford R, Nielsen C, Pedersen C, Balotta C, Rezza G, Ortiz M, de Mendoza C, Kücherer C, Poggensee G, Gill J, Porter K; CASCADE Virology Collaboration. Pillay D, et al. AIDS. 2006 Jan 2;20(1):21-8. doi: 10.1097/01.aids.0000196172.35056.b7. AIDS. 2006. PMID: 16327315

3

Prevalence of transmitted HIV-1 drug resistance and the role of resistance algorithms: data from seroconverters in the CASCADE collaboration from 1987 to 2003.

Masquelier B, Bhaskaran K, Pillay D, Gifford R, Balestre E, Jørgensen LB, Pedersen C, van der Hoek L, Prins M, Balotta C, Longo B, Kücherer C, Poggensee G, Ortiz M, de Mendoza C, Gill J, Fleury H, Porter K; CASCADE Collaboration. Masquelier B, et al. J Acquir Immune Defic Syndr. 2005 Dec 15;40(5):505-11. doi: 10.1097/01.qai.0000186361.42834.61. J Acquir Immune Defic Syndr. 2005. PMID: 16284524

4

Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1.

Gifford RJ, de Oliveira T, Rambaut A, Pybus OG, Dunn D, Vandamme AM, Kellam P, Pillay D; UK Collaborative Group on HIV Drug Resistance. Gifford RJ, et al. J Virol. 2007 Dec;81(23):13050-6. doi: 10.1128/JVI.00889-07. Epub 2007 Sep 26. J Virol. 2007. PMID: 17898057 Free PMC article.

5

Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naïve individuals.

Hué S, Gifford RJ, Dunn D, Fernhill E, Pillay D; UK Collaborative Group on HIV Drug Resistance. Hué S, et al. Among authors: gifford rj. J Virol. 2009 Mar;83(6):2645-54. doi: 10.1128/JVI.01556-08. Epub 2009 Jan 21. J Virol. 2009. PMID: 19158238 Free PMC article.

6

Evolution of transmitted HIV-1 with drug-resistance mutations in the absence of therapy: effects on CD4+ T-cell count and HIV-1 RNA load.

Bezemer D, de Ronde A, Prins M, Porter K, Gifford R, Pillay D, Masquelier B, Fleury H, Dabis F, Back N, Jurriaans S, van der Hoek L; CASCADE collaboration. Bezemer D, et al. Antivir Ther. 2006;11(2):173-8. Antivir Ther. 2006. PMID: 16640098

7

The HIV-1 subtype C epidemic in South America is linked to the United Kingdom.

de Oliveira T, Pillay D, Gifford RJ; UK Collaborative Group on HIV Drug Resistance. de Oliveira T, et al. Among authors: gifford rj. PLoS One. 2010 Feb 19;5(2):e9311. doi: 10.1371/journal.pone.0009311. PLoS One. 2010. PMID: 20174561 Free PMC article.

8

Assessment of automated genotyping protocols as tools for surveillance of HIV-1 genetic diversity.

Gifford R, de Oliveira T, Rambaut A, Myers RE, Gale CV, Dunn D, Shafer R, Vandamme AM, Kellam P, Pillay D; UK Collaborative Group on HIV Drug Resistance. Gifford R, et al. AIDS. 2006 Jul 13;20(11):1521-9. doi: 10.1097/01.aids.0000237368.64488.ae. AIDS. 2006. PMID: 16847407

9

The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance.

Gifford RJ, Liu TF, Rhee SY, Kiuchi M, Hue S, Pillay D, Shafer RW. Gifford RJ, et al. Bioinformatics. 2009 May 1;25(9):1197-8. doi: 10.1093/bioinformatics/btp134. Epub 2009 Mar 20. Bioinformatics. 2009. PMID: 19304876 Free PMC article.

10

Sequence editing by Apolipoprotein B RNA-editing catalytic component [corrected] and epidemiological surveillance of transmitted HIV-1 drug resistance.

Gifford RJ, Rhee SY, Eriksson N, Liu TF, Kiuchi M, Das AK, Shafer RW. Gifford RJ, et al. AIDS. 2008 Mar 30;22(6):717-25. doi: 10.1097/QAD.0b013e3282f5e07a. AIDS. 2008. PMID: 18356601 Free PMC article.

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