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CDD: specific functional annotation with the Conserved Domain Database.
Marchler-Bauer A, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Tasneem A, Thanki N, Yamashita RA, Zhang D, Zhang N, Bryant SH. Marchler-Bauer A, et al. Among authors: geer rc, geer ly. Nucleic Acids Res. 2009 Jan;37(Database issue):D205-10. doi: 10.1093/nar/gkn845. Epub 2008 Nov 4. Nucleic Acids Res. 2009. PMID: 18984618 Free PMC article.
MMDB: Entrez's 3D-structure database.
Wang Y, Anderson JB, Chen J, Geer LY, He S, Hurwitz DI, Liebert CA, Madej T, Marchler GH, Marchler-Bauer A, Panchenko AR, Shoemaker BA, Song JS, Thiessen PA, Yamashita RA, Bryant SH. Wang Y, et al. Among authors: geer ly. Nucleic Acids Res. 2002 Jan 1;30(1):249-52. doi: 10.1093/nar/30.1.249. Nucleic Acids Res. 2002. PMID: 11752307 Free PMC article.
CDD: a curated Entrez database of conserved domain alignments.
Marchler-Bauer A, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler GH, Mazumder R, Nikolskaya AN, Panchenko AR, Rao BS, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. Marchler-Bauer A, et al. Among authors: geer ly. Nucleic Acids Res. 2003 Jan 1;31(1):383-7. doi: 10.1093/nar/gkg087. Nucleic Acids Res. 2003. PMID: 12520028 Free PMC article.
MMDB: Entrez's 3D-structure database.
Chen J, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler-Bauer A, Marchler GH, Mazumder R, Nikolskaya AN, Rao BS, Panchenko AR, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. Chen J, et al. Among authors: geer ly. Nucleic Acids Res. 2003 Jan 1;31(1):474-7. doi: 10.1093/nar/gkg086. Nucleic Acids Res. 2003. PMID: 12520055 Free PMC article.
CDD: a Conserved Domain Database for protein classification.
Marchler-Bauer A, Anderson JB, Cherukuri PF, DeWeese-Scott C, Geer LY, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Marchler GH, Mullokandov M, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Yamashita RA, Yin JJ, Zhang D, Bryant SH. Marchler-Bauer A, et al. Among authors: geer ly. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D192-6. doi: 10.1093/nar/gki069. Nucleic Acids Res. 2005. PMID: 15608175 Free PMC article.
MMDB: annotating protein sequences with Entrez's 3D-structure database.
Wang Y, Addess KJ, Chen J, Geer LY, He J, He S, Lu S, Madej T, Marchler-Bauer A, Thiessen PA, Zhang N, Bryant SH. Wang Y, et al. Among authors: geer ly. Nucleic Acids Res. 2007 Jan;35(Database issue):D298-300. doi: 10.1093/nar/gkl952. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135201 Free PMC article.
The NCBI BioSystems database.
Geer LY, Marchler-Bauer A, Geer RC, Han L, He J, He S, Liu C, Shi W, Bryant SH. Geer LY, et al. Among authors: geer rc. Nucleic Acids Res. 2010 Jan;38(Database issue):D492-6. doi: 10.1093/nar/gkp858. Epub 2009 Oct 23. Nucleic Acids Res. 2010. PMID: 19854944 Free PMC article.
CDD: a Conserved Domain Database for the functional annotation of proteins.
Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Lu F, Marchler GH, Mullokandov M, Omelchenko MV, Robertson CL, Song JS, Thanki N, Yamashita RA, Zhang D, Zhang N, Zheng C, Bryant SH. Marchler-Bauer A, et al. Among authors: geer rc, geer ly. Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24. Nucleic Acids Res. 2011. PMID: 21109532 Free PMC article.
49 results