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Page 1
The genome Assembly Archive: a new public resource.
Salzberg SL, Church D, DiCuccio M, Yaschenko E, Ostell J. Salzberg SL, et al. PLoS Biol. 2004 Sep;2(9):E285. doi: 10.1371/journal.pbio.0020285. Epub 2004 Sep 14. PLoS Biol. 2004. PMID: 15367931 Free PMC article.
Identifying bacterial genes and endosymbiont DNA with Glimmer.
Delcher AL, Bratke KA, Powers EC, Salzberg SL. Delcher AL, et al. Among authors: salzberg sl. Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19. Bioinformatics. 2007. PMID: 17237039 Free PMC article.
Minimus: a fast, lightweight genome assembler.
Sommer DD, Delcher AL, Salzberg SL, Pop M. Sommer DD, et al. Among authors: salzberg sl. BMC Bioinformatics. 2007 Feb 26;8:64. doi: 10.1186/1471-2105-8-64. BMC Bioinformatics. 2007. PMID: 17324286 Free PMC article.
Comprehensive DNA signature discovery and validation.
Phillippy AM, Mason JA, Ayanbule K, Sommer DD, Taviani E, Huq A, Colwell RR, Knight IT, Salzberg SL. Phillippy AM, et al. Among authors: salzberg sl. PLoS Comput Biol. 2007 May;3(5):e98. doi: 10.1371/journal.pcbi.0030098. Epub 2007 Apr 20. PLoS Comput Biol. 2007. PMID: 17511514 Free PMC article.
Bioinformatics challenges of new sequencing technology.
Pop M, Salzberg SL. Pop M, et al. Among authors: salzberg sl. Trends Genet. 2008 Mar;24(3):142-9. doi: 10.1016/j.tig.2007.12.006. Epub 2008 Feb 11. Trends Genet. 2008. PMID: 18262676 Free PMC article. Review.
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A.
Salzberg SL, Sommer DD, Schatz MC, Phillippy AM, Rabinowicz PD, Tsuge S, Furutani A, Ochiai H, Delcher AL, Kelley D, Madupu R, Puiu D, Radune D, Shumway M, Trapnell C, Aparna G, Jha G, Pandey A, Patil PB, Ishihara H, Meyer DF, Szurek B, Verdier V, Koebnik R, Dow JM, Ryan RP, Hirata H, Tsuyumu S, Won Lee S, Seo YS, Sriariyanum M, Ronald PC, Sonti RV, Van Sluys MA, Leach JE, White FF, Bogdanove AJ. Salzberg SL, et al. BMC Genomics. 2008 May 1;9:204. doi: 10.1186/1471-2164-9-204. BMC Genomics. 2008. PMID: 18452608 Free PMC article.
401 results