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PHYRN: a robust method for phylogenetic analysis of highly divergent sequences.
Bhardwaj G, Ko KD, Hong Y, Zhang Z, Ho NL, Chintapalli SV, Kline LA, Gotlin M, Hartranft DN, Patterson ME, Dave F, Smith EJ, Holmes EC, Patterson RL, van Rossum DB. Bhardwaj G, et al. PLoS One. 2012;7(4):e34261. doi: 10.1371/journal.pone.0034261. Epub 2012 Apr 13. PLoS One. 2012. PMID: 22514627 Free PMC article.
TRP_2, a lipid/trafficking domain that mediates diacylglycerol-induced vesicle fusion.
van Rossum DB, Oberdick D, Rbaibi Y, Bhardwaj G, Barrow RK, Nikolaidis N, Snyder SH, Kiselyov K, Patterson RL. van Rossum DB, et al. Among authors: bhardwaj g. J Biol Chem. 2008 Dec 5;283(49):34384-92. doi: 10.1074/jbc.M804707200. Epub 2008 Sep 29. J Biol Chem. 2008. PMID: 19043047 Free PMC article.
We recently modeled transient receptor potential (TRP) channels using the Gestalt Domain Detection Algorithm-Basic Local Alignment Tool (GDDA-BLAST), which derives structural, functional, and evolutionary information from primary amino acid sequences using phylogenetic profiles ( …
We recently modeled transient receptor potential (TRP) channels using the Gestalt Domain Detection Algorithm-Basic Local Alignment Tool (GDD …
Predicting protein folds with fold-specific PSSM libraries.
Hong Y, Chintapalli SV, Ko KD, Bhardwaj G, Zhang Z, van Rossum D, Patterson RL. Hong Y, et al. Among authors: bhardwaj g. PLoS One. 2011;6(6):e20557. doi: 10.1371/journal.pone.0020557. Epub 2011 Jun 16. PLoS One. 2011. PMID: 21698189 Free PMC article.
Reevaluation of the evolutionary events within recA/RAD51 phylogeny.
Chintapalli SV, Bhardwaj G, Babu J, Hadjiyianni L, Hong Y, Todd GK, Boosalis CA, Zhang Z, Zhou X, Ma H, Anishkin A, van Rossum DB, Patterson RL. Chintapalli SV, et al. Among authors: bhardwaj g. BMC Genomics. 2013 Apr 10;14:240. doi: 10.1186/1471-2164-14-240. BMC Genomics. 2013. PMID: 23574621 Free PMC article.
Targeting Btk/Etk of prostate cancer cells by a novel dual inhibitor.
Guo W, Liu R, Bhardwaj G, Yang JC, Changou C, Ma AH, Mazloom A, Chintapalli S, Xiao K, Xiao W, Kumaresan P, Sanchez E, Yeh CT, Evans CP, Patterson R, Lam KS, Kung HJ. Guo W, et al. Among authors: bhardwaj g. Cell Death Dis. 2014 Sep 4;5(9):e1409. doi: 10.1038/cddis.2014.343. Cell Death Dis. 2014. PMID: 25188519 Free PMC article.
176 results