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Finding candidate genes under positive selection in Non-model species: examples of genes involved in host specialization in pathogens.
Aguileta G, Lengelle J, Marthey S, Chiapello H, Rodolphe F, Gendrault A, Yockteng R, Vercken E, Devier B, Fontaine MC, Wincker P, Dossat C, Cruaud C, Couloux A, Giraud T. Aguileta G, et al. Among authors: chiapello h. Mol Ecol. 2010 Jan;19(2):292-306. doi: 10.1111/j.1365-294X.2009.04454.x. Epub 2009 Dec 8. Mol Ecol. 2010. PMID: 20041992
FUNYBASE: a FUNgal phYlogenomic dataBASE.
Marthey S, Aguileta G, Rodolphe F, Gendrault A, Giraud T, Fournier E, Lopez-Villavicencio M, Gautier A, Lebrun MH, Chiapello H. Marthey S, et al. Among authors: chiapello h. BMC Bioinformatics. 2008 Oct 27;9:456. doi: 10.1186/1471-2105-9-456. BMC Bioinformatics. 2008. PMID: 18954438 Free PMC article.
Genes under positive selection in a model plant pathogenic fungus, Botrytis.
Aguileta G, Lengelle J, Chiapello H, Giraud T, Viaud M, Fournier E, Rodolphe F, Marthey S, Ducasse A, Gendrault A, Poulain J, Wincker P, Gout L. Aguileta G, et al. Among authors: chiapello h. Infect Genet Evol. 2012 Jul;12(5):987-96. doi: 10.1016/j.meegid.2012.02.012. Epub 2012 Mar 3. Infect Genet Evol. 2012. PMID: 22406010
PERMANENT GENETIC RESOURCES: Isolation of 60 polymorphic microsatellite loci in EST libraries of four sibling species of the phytopathogenic fungal complex Microbotryum.
Giraud T, Yockteng R, Marthey S, Chiapello H, Jonot O, Lopez-Villavicencio M, DE Vienne DM, Hood ME, Refregier G, Gendrault-Jacquemard A, Wincker P, Dossat C. Giraud T, et al. Among authors: chiapello h. Mol Ecol Resour. 2008 Mar;8(2):387-92. doi: 10.1111/j.1471-8286.2007.01967.x. Mol Ecol Resour. 2008. PMID: 21585800
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.
Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, Calteau A, Chiapello H, Clermont O, Cruveiller S, Danchin A, Diard M, Dossat C, Karoui ME, Frapy E, Garry L, Ghigo JM, Gilles AM, Johnson J, Le Bouguénec C, Lescat M, Mangenot S, Martinez-Jéhanne V, Matic I, Nassif X, Oztas S, Petit MA, Pichon C, Rouy Z, Ruf CS, Schneider D, Tourret J, Vacherie B, Vallenet D, Médigue C, Rocha EP, Denamur E. Touchon M, et al. Among authors: chiapello h. PLoS Genet. 2009 Jan;5(1):e1000344. doi: 10.1371/journal.pgen.1000344. Epub 2009 Jan 23. PLoS Genet. 2009. PMID: 19165319 Free PMC article.
47 results