Kavraki LE - Search Results

1

Electrostatic contributions drive the interaction between Staphylococcus aureus protein Efb-C and its complement target C3d.

Haspel N, Ricklin D, Geisbrecht BV, Kavraki LE, Lambris JD. Haspel N, et al. Among authors: kavraki le. Protein Sci. 2008 Nov;17(11):1894-906. doi: 10.1110/ps.036624.108. Epub 2008 Aug 7. Protein Sci. 2008. PMID: 18687868 Free PMC article.

2

Recurrent use of evolutionary importance for functional annotation of proteins based on local structural similarity.

Kristensen DM, Chen BY, Fofanov VY, Ward RM, Lisewski AM, Kimmel M, Kavraki LE, Lichtarge O. Kristensen DM, et al. Among authors: kavraki le. Protein Sci. 2006 Jun;15(6):1530-6. doi: 10.1110/ps.062152706. Epub 2006 May 2. Protein Sci. 2006. PMID: 16672239 Free PMC article.

3

Unfolding the fold of cyclic cysteine-rich peptides.

Shehu A, Kavraki LE, Clementi C. Shehu A, et al. Among authors: kavraki le. Protein Sci. 2008 Mar;17(3):482-93. doi: 10.1110/ps.073142708. Protein Sci. 2008. PMID: 18287281 Free PMC article.

4

Multi-scale characterization of the energy landscape of proteins with application to the C3D/Efb-C complex.

Haspel N, Geisbrecht BV, Lambris J, Kavraki L. Haspel N, et al. Proteins. 2010 Mar;78(4):1004-14. doi: 10.1002/prot.22624. Proteins. 2010. PMID: 19899169 Free PMC article.

5

Tracing conformational changes in proteins.

Haspel N, Moll M, Baker ML, Chiu W, Kavraki LE. Haspel N, et al. Among authors: kavraki le. BMC Struct Biol. 2010 May 17;10 Suppl 1(Suppl 1):S1. doi: 10.1186/1472-6807-10-S1-S1. BMC Struct Biol. 2010. PMID: 20487508 Free PMC article.

6

Coarse-Grained Conformational Sampling of Protein Structure Improves the Fit to Experimental Hydrogen-Exchange Data.

Devaurs D, Antunes DA, Papanastasiou M, Moll M, Ricklin D, Lambris JD, Kavraki LE. Devaurs D, et al. Among authors: kavraki le. Front Mol Biosci. 2017 Mar 10;4:13. doi: 10.3389/fmolb.2017.00013. eCollection 2017. Front Mol Biosci. 2017. PMID: 28344973 Free PMC article.

7

Native State of Complement Protein C3d Analysed via Hydrogen Exchange and Conformational Sampling.

Devaurs D, Papanastasiou M, Antunes DA, Abella JR, Moll M, Ricklin D, Lambris JD, Kavraki LE. Devaurs D, et al. Among authors: kavraki le. Int J Comput Biol Drug Des. 2018;11(1-2):90-113. doi: 10.1504/IJCBDD.2018.090834. Epub 2018 Mar 24. Int J Comput Biol Drug Des. 2018. PMID: 30700993 Free PMC article.

8

Understanding protein flexibility through dimensionality reduction.

Teodoro ML, Phillips GN Jr, Kavraki LE. Teodoro ML, et al. Among authors: kavraki le. J Comput Biol. 2003;10(3-4):617-34. doi: 10.1089/10665270360688228. J Comput Biol. 2003. PMID: 12935348

9

Algorithms for structural comparison and statistical analysis of 3D protein motifs.

Chen BY, Fofanov VY, Kristensen DM, Kimmel M, Lichtarge O, Kavraki LE. Chen BY, et al. Among authors: kavraki le. Pac Symp Biocomput. 2005:334-45. Pac Symp Biocomput. 2005. PMID: 15759639 Free article.

10

On the characterization of protein native state ensembles.

Shehu A, Kavraki LE, Clementi C. Shehu A, et al. Among authors: kavraki le. Biophys J. 2007 Mar 1;92(5):1503-11. doi: 10.1529/biophysj.106.094409. Epub 2006 Dec 8. Biophys J. 2007. PMID: 17158570 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

86 results

Search Page

Filters