Kopka J - Search Results

1

Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants.

van Dongen JT, Fröhlich A, Ramírez-Aguilar SJ, Schauer N, Fernie AR, Erban A, Kopka J, Clark J, Langer A, Geigenberger P. van Dongen JT, et al. Among authors: kopka j. Ann Bot. 2009 Jan;103(2):269-80. doi: 10.1093/aob/mcn126. Epub 2008 Jul 25. Ann Bot. 2009. PMID: 18660497 Free PMC article.

2

Metabolite profiling for plant functional genomics.

Fiehn O, Kopka J, Dörmann P, Altmann T, Trethewey RN, Willmitzer L. Fiehn O, et al. Among authors: kopka j. Nat Biotechnol. 2000 Nov;18(11):1157-61. doi: 10.1038/81137. Nat Biotechnol. 2000. PMID: 11062433

3

Transgenic Arabidopsis plants can accumulate polyhydroxybutyrate to up to 4% of their fresh weight.

Bohmert K, Balbo I, Kopka J, Mittendorf V, Nawrath C, Poirier Y, Tischendorf G, Trethewey RN, Willmitzer L. Bohmert K, et al. Among authors: kopka j. Planta. 2000 Nov;211(6):841-5. doi: 10.1007/s004250000350. Planta. 2000. PMID: 11144269

4

Parallel analysis of transcript and metabolic profiles: a new approach in systems biology.

Urbanczyk-Wochniak E, Luedemann A, Kopka J, Selbig J, Roessner-Tunali U, Willmitzer L, Fernie AR. Urbanczyk-Wochniak E, et al. Among authors: kopka j. EMBO Rep. 2003 Oct;4(10):989-93. doi: 10.1038/sj.embor.embor944. Epub 2003 Sep 12. EMBO Rep. 2003. PMID: 12973302 Free PMC article.

5

Metabolite profiling in plant biology: platforms and destinations.

Kopka J, Fernie A, Weckwerth W, Gibon Y, Stitt M. Kopka J, et al. Genome Biol. 2004;5(6):109. doi: 10.1186/gb-2004-5-6-109. Epub 2004 May 18. Genome Biol. 2004. PMID: 15186482 Free PMC article. Review.

6

GMD@CSB.DB: the Golm Metabolome Database.

Kopka J, Schauer N, Krueger S, Birkemeyer C, Usadel B, Bergmüller E, Dörmann P, Weckwerth W, Gibon Y, Stitt M, Willmitzer L, Fernie AR, Steinhauser D. Kopka J, et al. Bioinformatics. 2005 Apr 15;21(8):1635-8. doi: 10.1093/bioinformatics/bti236. Epub 2004 Dec 21. Bioinformatics. 2005. PMID: 15613389

7

Metabolome analysis: the potential of in vivo labeling with stable isotopes for metabolite profiling.

Birkemeyer C, Luedemann A, Wagner C, Erban A, Kopka J. Birkemeyer C, et al. Among authors: kopka j. Trends Biotechnol. 2005 Jan;23(1):28-33. doi: 10.1016/j.tibtech.2004.12.001. Trends Biotechnol. 2005. PMID: 15629855 Review.

8

GC-MS libraries for the rapid identification of metabolites in complex biological samples.

Schauer N, Steinhauser D, Strelkov S, Schomburg D, Allison G, Moritz T, Lundgren K, Roessner-Tunali U, Forbes MG, Willmitzer L, Fernie AR, Kopka J. Schauer N, et al. Among authors: kopka j. FEBS Lett. 2005 Feb 28;579(6):1332-7. doi: 10.1016/j.febslet.2005.01.029. Epub 2005 Jan 28. FEBS Lett. 2005. PMID: 15733837 Free article.

9

Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves.

Urbanczyk-Wochniak E, Baxter C, Kolbe A, Kopka J, Sweetlove LJ, Fernie AR. Urbanczyk-Wochniak E, et al. Among authors: kopka j. Planta. 2005 Aug;221(6):891-903. doi: 10.1007/s00425-005-1483-y. Epub 2005 Mar 3. Planta. 2005. PMID: 15744496

10

Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of Arabidopsis plants.

Nikiforova VJ, Kopka J, Tolstikov V, Fiehn O, Hopkins L, Hawkesford MJ, Hesse H, Hoefgen R. Nikiforova VJ, et al. Among authors: kopka j. Plant Physiol. 2005 May;138(1):304-18. doi: 10.1104/pp.104.053793. Epub 2005 Apr 15. Plant Physiol. 2005. PMID: 15834012 Free PMC article.

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