Koide S - Search Results

1

Understanding mechanisms governing protein-protein interactions from synthetic binding interfaces.

Kossiakoff AA, Koide S. Kossiakoff AA, et al. Among authors: koide s. Curr Opin Struct Biol. 2008 Aug;18(4):499-506. doi: 10.1016/j.sbi.2008.06.004. Epub 2008 Aug 4. Curr Opin Struct Biol. 2008. PMID: 18638552 Review.

2

High-affinity single-domain binding proteins with a binary-code interface.

Koide A, Gilbreth RN, Esaki K, Tereshko V, Koide S. Koide A, et al. Among authors: koide s. Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6632-7. doi: 10.1073/pnas.0700149104. Epub 2007 Apr 9. Proc Natl Acad Sci U S A. 2007. PMID: 17420456 Free PMC article.

3

High-throughput generation of synthetic antibodies from highly functional minimalist phage-displayed libraries.

Fellouse FA, Esaki K, Birtalan S, Raptis D, Cancasci VJ, Koide A, Jhurani P, Vasser M, Wiesmann C, Kossiakoff AA, Koide S, Sidhu SS. Fellouse FA, et al. Among authors: koide s, koide a. J Mol Biol. 2007 Nov 2;373(4):924-40. doi: 10.1016/j.jmb.2007.08.005. Epub 2007 Aug 19. J Mol Biol. 2007. PMID: 17825836

4

Phage display for engineering and analyzing protein interaction interfaces.

Sidhu SS, Koide S. Sidhu SS, et al. Among authors: koide s. Curr Opin Struct Biol. 2007 Aug;17(4):481-7. doi: 10.1016/j.sbi.2007.08.007. Epub 2007 Sep 17. Curr Opin Struct Biol. 2007. PMID: 17870470 Review.

5

Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope.

Koide A, Tereshko V, Uysal S, Margalef K, Kossiakoff AA, Koide S. Koide A, et al. Among authors: koide s. J Mol Biol. 2007 Nov 2;373(4):941-53. doi: 10.1016/j.jmb.2007.08.027. Epub 2007 Aug 21. J Mol Biol. 2007. PMID: 17888451 Free PMC article.

6

Synthetic antibodies for specific recognition and crystallization of structured RNA.

Ye JD, Tereshko V, Frederiksen JK, Koide A, Fellouse FA, Sidhu SS, Koide S, Kossiakoff AA, Piccirilli JA. Ye JD, et al. Among authors: koide s, koide a. Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):82-7. doi: 10.1073/pnas.0709082105. Epub 2007 Dec 27. Proc Natl Acad Sci U S A. 2008. PMID: 18162543 Free PMC article.

7

Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold.

Tereshko V, Uysal S, Koide A, Margalef K, Koide S, Kossiakoff AA. Tereshko V, et al. Among authors: koide s, koide a. Protein Sci. 2008 Jul;17(7):1175-87. doi: 10.1110/ps.034892.108. Epub 2008 Apr 29. Protein Sci. 2008. PMID: 18445622 Free PMC article.

8

Design of protein function leaps by directed domain interface evolution.

Huang J, Koide A, Makabe K, Koide S. Huang J, et al. Among authors: koide s, koide a. Proc Natl Acad Sci U S A. 2008 May 6;105(18):6578-83. doi: 10.1073/pnas.0801097105. Epub 2008 Apr 29. Proc Natl Acad Sci U S A. 2008. PMID: 18445649 Free PMC article.

9

A dominant conformational role for amino acid diversity in minimalist protein-protein interfaces.

Gilbreth RN, Esaki K, Koide A, Sidhu SS, Koide S. Gilbreth RN, et al. Among authors: koide s, koide a. J Mol Biol. 2008 Aug 29;381(2):407-18. doi: 10.1016/j.jmb.2008.06.014. Epub 2008 Jun 12. J Mol Biol. 2008. PMID: 18602117 Free PMC article.

10

High-throughput analysis of the protein sequence-stability landscape using a quantitative yeast surface two-hybrid system and fragment reconstitution.

Dutta S, Koide A, Koide S. Dutta S, et al. Among authors: koide s, koide a. J Mol Biol. 2008 Oct 10;382(3):721-33. doi: 10.1016/j.jmb.2008.07.036. Epub 2008 Jul 22. J Mol Biol. 2008. PMID: 18674545 Free PMC article.

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