Khodursky A - Search Results

1

Overexpression of phage HK022 Nun protein is toxic for Escherichia coli.

Uc-Mass A, Khodursky A, Brown L, Gottesman ME. Uc-Mass A, et al. Among authors: khodursky a. J Mol Biol. 2008 Jul 25;380(5):812-9. doi: 10.1016/j.jmb.2008.05.030. Epub 2008 May 17. J Mol Biol. 2008. PMID: 18571198 Free PMC article.

2

Escherichia coli spotted double-strand DNA microarrays: RNA extraction, labeling, hybridization, quality control, and data management.

Khodursky AB, Bernstein JA, Peter BJ, Rhodius V, Wendisch VF, Zimmer DP. Khodursky AB, et al. Methods Mol Biol. 2003;224:61-78. doi: 10.1385/1-59259-364-X:61. Methods Mol Biol. 2003. PMID: 12710666 No abstract available.

3

Transient growth arrest in Escherichia coli induced by chromosome condensation.

Edwards AL, Sangurdekar DP, Jeong KS, Khodursky AB, Rybenkov VV. Edwards AL, et al. Among authors: khodursky ab. PLoS One. 2013 Dec 23;8(12):e84027. doi: 10.1371/journal.pone.0084027. eCollection 2013. PLoS One. 2013. PMID: 24376785 Free PMC article.

4

Reconstruction of Escherichia coli transcriptional regulatory networks via regulon-based associations.

Zare H, Sangurdekar D, Srivastava P, Kaveh M, Khodursky A. Zare H, et al. Among authors: khodursky a. BMC Syst Biol. 2009 Apr 14;3:39. doi: 10.1186/1752-0509-3-39. BMC Syst Biol. 2009. PMID: 19366454 Free PMC article.

5

Spatial patterns of transcriptional activity in the chromosome of Escherichia coli.

Jeong KS, Ahn J, Khodursky AB. Jeong KS, et al. Genome Biol. 2004;5(11):R86. doi: 10.1186/gb-2004-5-11-r86. Epub 2004 Oct 27. Genome Biol. 2004. PMID: 15535862 Free PMC article.

6

A classification based framework for quantitative description of large-scale microarray data.

Sangurdekar DP, Srienc F, Khodursky AB. Sangurdekar DP, et al. Genome Biol. 2006;7(4):R32. doi: 10.1186/gb-2006-7-4-r32. Epub 2006 Apr 20. Genome Biol. 2006. PMID: 16626502 Free PMC article.

7

Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli.

Peter BJ, Arsuaga J, Breier AM, Khodursky AB, Brown PO, Cozzarelli NR. Peter BJ, et al. Genome Biol. 2004;5(11):R87. doi: 10.1186/gb-2004-5-11-r87. Epub 2004 Nov 1. Genome Biol. 2004. PMID: 15535863 Free PMC article.

8

Isolation of Escherichia coli mRNA and comparison of expression using mRNA and total RNA on DNA microarrays.

Wendisch VF, Zimmer DP, Khodursky A, Peter B, Cozzarelli N, Kustu S. Wendisch VF, et al. Among authors: khodursky a. Anal Biochem. 2001 Mar;290(2):205-13. doi: 10.1006/abio.2000.4982. Anal Biochem. 2001. PMID: 11237321

9

Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays.

Khodursky AB, Peter BJ, Schmid MB, DeRisi J, Botstein D, Brown PO, Cozzarelli NR. Khodursky AB, et al. Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9419-24. doi: 10.1073/pnas.97.17.9419. Proc Natl Acad Sci U S A. 2000. PMID: 10944214 Free PMC article.

10

Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays.

Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN. Bernstein JA, et al. Among authors: khodursky ab. Proc Natl Acad Sci U S A. 2002 Jul 23;99(15):9697-702. doi: 10.1073/pnas.112318199. Epub 2002 Jul 15. Proc Natl Acad Sci U S A. 2002. PMID: 12119387 Free PMC article.

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