Fan H - Search Results

1

Refining homology models by combining replica-exchange molecular dynamics and statistical potentials.

Zhu J, Fan H, Periole X, Honig B, Mark AE. Zhu J, et al. Among authors: fan h. Proteins. 2008 Sep;72(4):1171-88. doi: 10.1002/prot.22005. Proteins. 2008. PMID: 18338384 Free PMC article.

2

Relative stability of protein structures determined by X-ray crystallography or NMR spectroscopy: a molecular dynamics simulation study.

Fan H, Mark AE. Fan H, et al. Proteins. 2003 Oct 1;53(1):111-20. doi: 10.1002/prot.10496. Proteins. 2003. PMID: 12945054

3

Molecular dynamics simulations of the hydrophobin SC3 at a hydrophobic/hydrophilic interface.

Fan H, Wang X, Zhu J, Robillard GT, Mark AE. Fan H, et al. Proteins. 2006 Sep 1;64(4):863-73. doi: 10.1002/prot.20936. Proteins. 2006. PMID: 16770796 Free article.

4

Mimicking the action of folding chaperones by Hamiltonian replica-exchange molecular dynamics simulations: application in the refinement of de novo models.

Fan H, Periole X, Mark AE. Fan H, et al. Proteins. 2012 Jul;80(7):1744-54. doi: 10.1002/prot.24068. Epub 2012 Apr 13. Proteins. 2012. PMID: 22411697

5

Refinement of homology-based protein structures by molecular dynamics simulation techniques.

Fan H, Mark AE. Fan H, et al. Protein Sci. 2004 Jan;13(1):211-20. doi: 10.1110/ps.03381404. Protein Sci. 2004. PMID: 14691236 Free PMC article.

6

Mimicking the action of folding chaperones in molecular dynamics simulations: Application to the refinement of homology-based protein structures.

Fan H, Mark AE. Fan H, et al. Protein Sci. 2004 Apr;13(4):992-9. doi: 10.1110/ps.03449904. Epub 2004 Mar 9. Protein Sci. 2004. PMID: 15010545 Free PMC article.

7

Comparative study of generalized Born models: protein dynamics.

Fan H, Mark AE, Zhu J, Honig B. Fan H, et al. Proc Natl Acad Sci U S A. 2005 May 10;102(19):6760-4. doi: 10.1073/pnas.0408857102. Epub 2005 Apr 6. Proc Natl Acad Sci U S A. 2005. PMID: 15814616 Free PMC article.

8

Mimicking the action of GroEL in molecular dynamics simulations: application to the refinement of protein structures.

Fan H, Mark AE. Fan H, et al. Protein Sci. 2006 Mar;15(3):441-8. doi: 10.1110/ps.051721006. Epub 2006 Feb 1. Protein Sci. 2006. PMID: 16452612 Free PMC article.

9

How sensitive are nanosecond molecular dynamics simulations of proteins to changes in the force field?

Villa A, Fan H, Wassenaar T, Mark AE. Villa A, et al. Among authors: fan h. J Phys Chem B. 2007 May 31;111(21):6015-25. doi: 10.1021/jp068580v. Epub 2007 May 10. J Phys Chem B. 2007. PMID: 17489626

10

The Structural Basis for Activation and Inhibition of ZAP-70 Kinase Domain.

Huber RG, Fan H, Bond PJ. Huber RG, et al. Among authors: fan h. PLoS Comput Biol. 2015 Oct 16;11(10):e1004560. doi: 10.1371/journal.pcbi.1004560. eCollection 2015 Oct. PLoS Comput Biol. 2015. PMID: 26473606 Free PMC article.

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