Garate JA - Search Results

1

An eleven amino acid residue deletion expands the substrate specificity of acetyl xylan esterase II (AXE II) from Penicillium purpurogenum.

Colombres M, Garate JA, Lagos CF, Araya-Secchi R, Norambuena P, Quiroz S, Larrondo L, Pérez-Acle T, Eyzaguirre J. Colombres M, et al. Among authors: garate ja. J Comput Aided Mol Des. 2008 Jan;22(1):19-28. doi: 10.1007/s10822-007-9149-4. Epub 2007 Dec 1. J Comput Aided Mol Des. 2008. PMID: 18060506

2

Aquaporin Gating: A New Twist to Unravel Permeation through Water Channels.

Ozu M, Alvear-Arias JJ, Fernandez M, Caviglia A, Peña-Pichicoi A, Carrillo C, Carmona E, Otero-Gonzalez A, Garate JA, Amodeo G, Gonzalez C. Ozu M, et al. Among authors: garate ja. Int J Mol Sci. 2022 Oct 14;23(20):12317. doi: 10.3390/ijms232012317. Int J Mol Sci. 2022. PMID: 36293170 Free PMC article. Review.

3

Computational modeling study of functional microdomains in cannabinoid receptor type 1.

Gonzalez A, Duran LS, Araya-Secchi R, Garate JA, Pessoa-Mahana CD, Lagos CF, Perez-Acle T. Gonzalez A, et al. Among authors: garate ja. Bioorg Med Chem. 2008 Apr 15;16(8):4378-89. doi: 10.1016/j.bmc.2008.02.070. Epub 2008 Feb 26. Bioorg Med Chem. 2008. PMID: 18342519

4

Molecular dynamics study of the archaeal aquaporin AqpM.

Araya-Secchi R, Garate JA, Holmes DS, Perez-Acle T. Araya-Secchi R, et al. Among authors: garate ja. BMC Genomics. 2011 Dec 22;12 Suppl 4(Suppl 4):S8. doi: 10.1186/1471-2164-12-S4-S8. Epub 2011 Dec 22. BMC Genomics. 2011. PMID: 22369250 Free PMC article.

5

On the thermodynamics of carbon nanotube single-file water loading: free energy, energy and entropy calculations.

Garate JA, Perez-Acle T, Oostenbrink C. Garate JA, et al. Phys Chem Chem Phys. 2014 Mar 21;16(11):5119-28. doi: 10.1039/c3cp54554g. Phys Chem Chem Phys. 2014. PMID: 24477412

6

Characterization of a novel water pocket inside the human Cx26 hemichannel structure.

Araya-Secchi R, Perez-Acle T, Kang SG, Huynh T, Bernardin A, Escalona Y, Garate JA, Martínez AD, García IE, Sáez JC, Zhou R. Araya-Secchi R, et al. Among authors: garate ja. Biophys J. 2014 Aug 5;107(3):599-612. doi: 10.1016/j.bpj.2014.05.037. Biophys J. 2014. PMID: 25099799 Free PMC article.

7

From dimers to collective dipoles: Structure and dynamics of methanol/ethanol partition by narrow carbon nanotubes.

Garate JA, Perez-Acle T. Garate JA, et al. J Chem Phys. 2016 Feb 14;144(6):064105. doi: 10.1063/1.4941331. J Chem Phys. 2016. PMID: 26874480

8

Exploring the Membrane Potential of Simple Dual-Membrane Systems as Models for Gap-Junction Channels.

Escalona Y, Garate JA, Araya-Secchi R, Huynh T, Zhou R, Perez-Acle T. Escalona Y, et al. Among authors: garate ja. Biophys J. 2016 Jun 21;110(12):2678-2688. doi: 10.1016/j.bpj.2016.05.005. Biophys J. 2016. PMID: 27332126 Free PMC article.

9

Accessing gap-junction channel structure-function relationships through molecular modeling and simulations.

Villanelo F, Escalona Y, Pareja-Barrueto C, Garate JA, Skerrett IM, Perez-Acle T. Villanelo F, et al. Among authors: garate ja. BMC Cell Biol. 2017 Jan 17;18(Suppl 1):5. doi: 10.1186/s12860-016-0121-9. BMC Cell Biol. 2017. PMID: 28124624 Free PMC article. Review.

10

RIP-MD: a tool to study residue interaction networks in protein molecular dynamics.

Contreras-Riquelme S, Garate JA, Perez-Acle T, Martin AJM. Contreras-Riquelme S, et al. Among authors: garate ja. PeerJ. 2018 Dec 7;6:e5998. doi: 10.7717/peerj.5998. eCollection 2018. PeerJ. 2018. PMID: 30568854 Free PMC article.

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