Kholodenko BN - Search Results

1

Ligand-dependent responses of the ErbB signaling network: experimental and modeling analyses.

Birtwistle MR, Hatakeyama M, Yumoto N, Ogunnaike BA, Hoek JB, Kholodenko BN. Birtwistle MR, et al. Among authors: kholodenko bn. Mol Syst Biol. 2007;3:144. doi: 10.1038/msb4100188. Epub 2007 Nov 13. Mol Syst Biol. 2007. PMID: 18004277 Free PMC article.

2

Four-dimensional dynamics of MAPK information processing systems.

Kholodenko BN, Birtwistle MR. Kholodenko BN, et al. Wiley Interdiscip Rev Syst Biol Med. 2009 Jul-Aug;1(1):28-44. doi: 10.1002/wsbm.16. Wiley Interdiscip Rev Syst Biol Med. 2009. PMID: 20182652 Free PMC article. Review.

3

Emergence of bimodal cell population responses from the interplay between analog single-cell signaling and protein expression noise.

Birtwistle MR, Rauch J, Kiyatkin A, Aksamitiene E, Dobrzyński M, Hoek JB, Kolch W, Ogunnaike BA, Kholodenko BN. Birtwistle MR, et al. Among authors: kholodenko bn. BMC Syst Biol. 2012 Aug 24;6:109. doi: 10.1186/1752-0509-6-109. BMC Syst Biol. 2012. PMID: 22920937 Free PMC article.

4

Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades.

Markevich NI, Hoek JB, Kholodenko BN. Markevich NI, et al. Among authors: kholodenko bn. J Cell Biol. 2004 Feb 2;164(3):353-9. doi: 10.1083/jcb.200308060. Epub 2004 Jan 26. J Cell Biol. 2004. PMID: 14744999 Free PMC article.

5

Long-range signaling by phosphoprotein waves arising from bistability in protein kinase cascades.

Markevich NI, Tsyganov MA, Hoek JB, Kholodenko BN. Markevich NI, et al. Among authors: kholodenko bn. Mol Syst Biol. 2006;2:61. doi: 10.1038/msb4100108. Epub 2006 Nov 14. Mol Syst Biol. 2006. PMID: 17102806 Free PMC article.

6

Systems-level interactions between insulin-EGF networks amplify mitogenic signaling.

Borisov N, Aksamitiene E, Kiyatkin A, Legewie S, Berkhout J, Maiwald T, Kaimachnikov NP, Timmer J, Hoek JB, Kholodenko BN. Borisov N, et al. Among authors: kholodenko bn. Mol Syst Biol. 2009;5:256. doi: 10.1038/msb.2009.19. Epub 2009 Apr 7. Mol Syst Biol. 2009. PMID: 19357636 Free PMC article.

7

Ligand-specific c-Fos expression emerges from the spatiotemporal control of ErbB network dynamics.

Nakakuki T, Birtwistle MR, Saeki Y, Yumoto N, Ide K, Nagashima T, Brusch L, Ogunnaike BA, Okada-Hatakeyama M, Kholodenko BN. Nakakuki T, et al. Among authors: kholodenko bn. Cell. 2010 May 28;141(5):884-96. doi: 10.1016/j.cell.2010.03.054. Epub 2010 May 20. Cell. 2010. PMID: 20493519 Free PMC article.

8

Quantifying gene network connectivity in silico: scalability and accuracy of a modular approach.

Yalamanchili N, Zak DE, Ogunnaike BA, Schwaber JS, Kriete A, Kholodenko BN. Yalamanchili N, et al. Among authors: kholodenko bn. Syst Biol (Stevenage). 2006 Jul;153(4):236-46. doi: 10.1049/ip-syb:20050090. Syst Biol (Stevenage). 2006. PMID: 16986625 Free PMC article.

9

Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains.

Borisov NM, Markevich NI, Hoek JB, Kholodenko BN. Borisov NM, et al. Among authors: kholodenko bn. Biosystems. 2006 Feb-Mar;83(2-3):152-66. doi: 10.1016/j.biosystems.2005.03.006. Epub 2005 Oct 19. Biosystems. 2006. PMID: 16242235 Free PMC article.

10

Endocytosis and signalling: a meeting with mathematics.

Birtwistle MR, Kholodenko BN. Birtwistle MR, et al. Among authors: kholodenko bn. Mol Oncol. 2009 Aug;3(4):308-20. doi: 10.1016/j.molonc.2009.05.009. Epub 2009 Jun 16. Mol Oncol. 2009. PMID: 19596615 Free PMC article. Review.

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