Stadler PF - Search Results

1

SnoReport: computational identification of snoRNAs with unknown targets.

Hertel J, Hofacker IL, Stadler PF. Hertel J, et al. Among authors: stadler pf. Bioinformatics. 2008 Jan 15;24(2):158-64. doi: 10.1093/bioinformatics/btm464. Epub 2007 Sep 25. Bioinformatics. 2008. PMID: 17895272

2

From sequences to shapes and back: a case study in RNA secondary structures.

Schuster P, Fontana W, Stadler PF, Hofacker IL. Schuster P, et al. Among authors: stadler pf. Proc Biol Sci. 1994 Mar 22;255(1344):279-84. doi: 10.1098/rspb.1994.0040. Proc Biol Sci. 1994. PMID: 7517565

3

Neutral networks in protein space: a computational study based on knowledge-based potentials of mean force.

Babajide A, Hofacker IL, Sippl MJ, Stadler PF. Babajide A, et al. Among authors: stadler pf. Fold Des. 1997;2(5):261-9. doi: 10.1016/S1359-0278(97)00037-0. Fold Des. 1997. PMID: 9261065

4

Automatic detection of conserved RNA structure elements in complete RNA virus genomes.

Hofacker IL, Fekete M, Flamm C, Huynen MA, Rauscher S, Stolorz PE, Stadler PF. Hofacker IL, et al. Among authors: stadler pf. Nucleic Acids Res. 1998 Aug 15;26(16):3825-36. doi: 10.1093/nar/26.16.3825. Nucleic Acids Res. 1998. PMID: 9685502 Free PMC article.

5

Automatic detection of conserved base pairing patterns in RNA virus genomes.

Hofacker IL, Stadler PF. Hofacker IL, et al. Among authors: stadler pf. Comput Chem. 1999 Jun 15;23(3-4):401-14. doi: 10.1016/s0097-8485(99)00013-3. Comput Chem. 1999. PMID: 10404627

6

Prediction of RNA base pairing probabilities on massively parallel computers.

Fekete M, Hofacker IL, Stadler PF. Fekete M, et al. Among authors: stadler pf. J Comput Biol. 2000 Feb-Apr;7(1-2):171-82. doi: 10.1089/10665270050081441. J Comput Biol. 2000. PMID: 10890394

7

Design of multistable RNA molecules.

Flamm C, Hofacker IL, Maurer-Stroh S, Stadler PF, Zehl M. Flamm C, et al. Among authors: stadler pf. RNA. 2001 Feb;7(2):254-65. doi: 10.1017/s1355838201000863. RNA. 2001. PMID: 11233982 Free PMC article.

8

Exploring protein sequence space using knowledge-based potentials.

Babajide A, Farber R, Hofacker IL, Inman J, Lapedes AS, Stadler PF. Babajide A, et al. Among authors: stadler pf. J Theor Biol. 2001 Sep 7;212(1):35-46. doi: 10.1006/jtbi.2001.2343. J Theor Biol. 2001. PMID: 11527443

9

Conserved RNA secondary structures in Picornaviridae genomes.

Witwer C, Rauscher S, Hofacker IL, Stadler PF. Witwer C, et al. Among authors: stadler pf. Nucleic Acids Res. 2001 Dec 15;29(24):5079-89. doi: 10.1093/nar/29.24.5079. Nucleic Acids Res. 2001. PMID: 11812840 Free PMC article.

10

Secondary structure prediction for aligned RNA sequences.

Hofacker IL, Fekete M, Stadler PF. Hofacker IL, et al. Among authors: stadler pf. J Mol Biol. 2002 Jun 21;319(5):1059-66. doi: 10.1016/S0022-2836(02)00308-X. J Mol Biol. 2002. PMID: 12079347

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