Provart NJ - Search Results

1

Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements.

Lan H, Carson R, Provart NJ, Bonner AJ. Lan H, et al. Among authors: provart nj. BMC Bioinformatics. 2007 Sep 21;8:358. doi: 10.1186/1471-2105-8-358. BMC Bioinformatics. 2007. PMID: 17888165 Free PMC article.

2

Multi-omics atlas of combinatorial abiotic stress responses in wheat.

Da Ros L, Bollina V, Soolanayakanahally R, Pahari S, Elferjani R, Kulkarni M, Vaid N, Risseuw E, Cram D, Pasha A, Esteban E, Konkin D, Provart N, Nambara E, Kagale S. Da Ros L, et al. Plant J. 2023 Nov;116(4):1118-1135. doi: 10.1111/tpj.16332. Epub 2023 Jun 28. Plant J. 2023. PMID: 37248640 Free article.

3

Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics.

Kim TW, Park CH, Hsu CC, Kim YW, Ko YW, Zhang Z, Zhu JY, Hsiao YC, Branon T, Kaasik K, Saldivar E, Li K, Pasha A, Provart NJ, Burlingame AL, Xu SL, Ting AY, Wang ZY. Kim TW, et al. Among authors: provart nj. Plant Cell. 2023 Mar 15;35(3):975-993. doi: 10.1093/plcell/koad013. Plant Cell. 2023. PMID: 36660928 Free PMC article.

4

Chromosome-level Genome Assembly of Euphorbia peplus, a Model System for Plant Latex, Reveals that Relative Lack of Ty3 Transposons Contributed to Its Small Genome Size.

Johnson AR, Yue Y, Carey SB, Park SJ, Kruse LH, Bao A, Pasha A, Harkess A, Provart NJ, Moghe GD, Frank MH. Johnson AR, et al. Among authors: provart nj. Genome Biol Evol. 2023 Mar 3;15(3):evad018. doi: 10.1093/gbe/evad018. Genome Biol Evol. 2023. PMID: 36757383 Free PMC article.

5

The coordinated regulation of early meiotic stages is dominated by non-coding RNAs and stage-specific transcription in wheat.

Jiang Y, N'Diaye A, Koh CS, Quilichini TD, Shunmugam ASK, Kirzinger MW, Konkin D, Bekkaoui Y, Sari E, Pasha A, Esteban E, Provart NJ, Higgins JD, Rozwadowski K, Sharpe AG, Pozniak CJ, Kagale S. Jiang Y, et al. Among authors: provart nj. Plant J. 2023 Apr;114(1):209-224. doi: 10.1111/tpj.16125. Epub 2023 Feb 18. Plant J. 2023. PMID: 36710629 Free article.

6

Information theory and machine learning illuminate large-scale metabolomic responses of Brachypodium distachyon to environmental change.

Mahood EH, Bennett AA, Komatsu K, Kruse LH, Lau V, Rahmati Ishka M, Jiang Y, Bravo A, Louie K, Bowen BP, Harrison MJ, Provart NJ, Vatamaniuk OK, Moghe GD. Mahood EH, et al. Among authors: provart nj. Plant J. 2023 May;114(3):463-481. doi: 10.1111/tpj.16160. Epub 2023 Mar 11. Plant J. 2023. PMID: 36880270 Free article.

7

A comprehensive expression analysis of the Arabidopsis proline-rich extensin-like receptor kinase gene family using bioinformatic and experimental approaches.

Nakhamchik A, Zhao Z, Provart NJ, Shiu SH, Keatley SK, Cameron RK, Goring DR. Nakhamchik A, et al. Among authors: provart nj. Plant Cell Physiol. 2004 Dec;45(12):1875-81. doi: 10.1093/pcp/pch206. Plant Cell Physiol. 2004. PMID: 15653807

8

The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses.

Toufighi K, Brady SM, Austin R, Ly E, Provart NJ. Toufighi K, et al. Among authors: provart nj. Plant J. 2005 Jul;43(1):153-63. doi: 10.1111/j.1365-313X.2005.02437.x. Plant J. 2005. PMID: 15960624 Free article.

9

Gene expression analyses for elucidating mechanisms of hormonal action in plants.

Bassel GW, Provart NJ. Bassel GW, et al. Among authors: provart nj. Methods Mol Biol. 2009;495:21-37. doi: 10.1007/978-1-59745-477-3_3. Methods Mol Biol. 2009. PMID: 19085149

10

Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions.

Bassel GW, Lan H, Glaab E, Gibbs DJ, Gerjets T, Krasnogor N, Bonner AJ, Holdsworth MJ, Provart NJ. Bassel GW, et al. Among authors: provart nj. Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9709-14. doi: 10.1073/pnas.1100958108. Epub 2011 May 18. Proc Natl Acad Sci U S A. 2011. PMID: 21593420 Free PMC article.

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