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Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.
Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, Powell E, Keefe R, Ehrlich NE, Shen K, Hayes J, Barbadora K, Klimke W, Dernovoy D, Tatusova T, Parkhill J, Bentley SD, Post JC, Ehrlich GD, Hu FZ. Hiller NL, et al. Among authors: tatusova t. J Bacteriol. 2007 Nov;189(22):8186-95. doi: 10.1128/JB.00690-07. Epub 2007 Aug 3. J Bacteriol. 2007. PMID: 17675389 Free PMC article.
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.
Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL. Ghedin E, et al. Among authors: tatusova t. Nature. 2005 Oct 20;437(7062):1162-6. doi: 10.1038/nature04239. Epub 2005 Oct 5. Nature. 2005. PMID: 16208317
Reannotation of Shewanella oneidensis genome.
Daraselia N, Dernovoy D, Tian Y, Borodovsky M, Tatusov R, Tatusova T. Daraselia N, et al. Among authors: tatusova t. OMICS. 2003 Summer;7(2):171-5. doi: 10.1089/153623103322246566. OMICS. 2003. PMID: 14506846
FLAN: a web server for influenza virus genome annotation.
Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Tatusova T. Bao Y, et al. Among authors: tatusova t. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W280-4. doi: 10.1093/nar/gkm354. Epub 2007 Jun 1. Nucleic Acids Res. 2007. PMID: 17545199 Free PMC article.
NCBI Reference Sequences: current status, policy and new initiatives.
Pruitt KD, Tatusova T, Klimke W, Maglott DR. Pruitt KD, et al. Among authors: tatusova t. Nucleic Acids Res. 2009 Jan;37(Database issue):D32-6. doi: 10.1093/nar/gkn721. Epub 2008 Oct 16. Nucleic Acids Res. 2009. PMID: 18927115 Free PMC article.
The National Center for Biotechnology Information's Protein Clusters Database.
Klimke W, Agarwala R, Badretdin A, Chetvernin S, Ciufo S, Fedorov B, Kiryutin B, O'Neill K, Resch W, Resenchuk S, Schafer S, Tolstoy I, Tatusova T. Klimke W, et al. Among authors: tatusova t. Nucleic Acids Res. 2009 Jan;37(Database issue):D216-23. doi: 10.1093/nar/gkn734. Epub 2008 Oct 21. Nucleic Acids Res. 2009. PMID: 18940865 Free PMC article.
Solving the Problem: Genome Annotation Standards before the Data Deluge.
Klimke W, O'Donovan C, White O, Brister JR, Clark K, Fedorov B, Mizrachi I, Pruitt KD, Tatusova T. Klimke W, et al. Among authors: tatusova t. Stand Genomic Sci. 2011 Oct 15;5(1):168-93. doi: 10.4056/sigs.2084864. Epub 2011 Oct 1. Stand Genomic Sci. 2011. PMID: 22180819 Free PMC article.
Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop.
Brister JR, Bao Y, Kuiken C, Lefkowitz EJ, Mercier PL, Leplae R, Madupu R, Scheuermann RH, Schobel S, Seto D, Shrivastava S, Sterk P, Zeng Q, Klimke W, Tatusova T. Brister JR, et al. Among authors: tatusova t. Viruses. 2010 Oct;2(10):2258-2268. doi: 10.3390/v2102258. Epub 2010 Oct 13. Viruses. 2010. PMID: 21994619 Free PMC article.
82 results