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BS Seeker: precise mapping for bisulfite sequencing.
Chen PY, Cokus SJ, Pellegrini M. Chen PY, et al. BMC Bioinformatics. 2010 Apr 23;11:203. doi: 10.1186/1471-2105-11-203. BMC Bioinformatics. 2010. PMID: 20416082 Free PMC article.
Conservation and divergence of methylation patterning in plants and animals.
Feng S, Cokus SJ, Zhang X, Chen PY, Bostick M, Goll MG, Hetzel J, Jain J, Strauss SH, Halpern ME, Ukomadu C, Sadler KC, Pradhan S, Pellegrini M, Jacobsen SE. Feng S, et al. Among authors: cokus sj. Proc Natl Acad Sci U S A. 2010 May 11;107(19):8689-94. doi: 10.1073/pnas.1002720107. Epub 2010 Apr 15. Proc Natl Acad Sci U S A. 2010. PMID: 20395551 Free PMC article.
Inferring protein interactions from phylogenetic distance matrices.
Gertz J, Elfond G, Shustrova A, Weisinger M, Pellegrini M, Cokus S, Rothschild B. Gertz J, et al. Among authors: cokus s. Bioinformatics. 2003 Nov 1;19(16):2039-45. doi: 10.1093/bioinformatics/btg278. Bioinformatics. 2003. PMID: 14594708
A naïve Bayesian classifier for identifying plant microRNAs.
Douglass S, Hsu SW, Cokus S, Goldberg RB, Harada JJ, Pellegrini M. Douglass S, et al. Among authors: cokus s. Plant J. 2016 Jun;86(6):481-92. doi: 10.1111/tpj.13180. Epub 2016 Jun 20. Plant J. 2016. PMID: 27061965 Free article.
37 results