Minovitsky S - Search Results

1

Multiple whole genome alignments and novel biomedical applications at the VISTA portal.

Brudno M, Poliakov A, Minovitsky S, Ratnere I, Dubchak I. Brudno M, et al. Among authors: minovitsky s. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W669-74. doi: 10.1093/nar/gkm279. Epub 2007 May 8. Nucleic Acids Res. 2007. PMID: 17488840 Free PMC article.

2

VISTA Enhancer Browser--a database of tissue-specific human enhancers.

Visel A, Minovitsky S, Dubchak I, Pennacchio LA. Visel A, et al. Among authors: minovitsky s. Nucleic Acids Res. 2007 Jan;35(Database issue):D88-92. doi: 10.1093/nar/gkl822. Epub 2006 Nov 27. Nucleic Acids Res. 2007. PMID: 17130149 Free PMC article.

3

The genome portal of the Department of Energy Joint Genome Institute.

Grigoriev IV, Nordberg H, Shabalov I, Aerts A, Cantor M, Goodstein D, Kuo A, Minovitsky S, Nikitin R, Ohm RA, Otillar R, Poliakov A, Ratnere I, Riley R, Smirnova T, Rokhsar D, Dubchak I. Grigoriev IV, et al. Among authors: minovitsky s. Nucleic Acids Res. 2012 Jan;40(Database issue):D26-32. doi: 10.1093/nar/gkr947. Epub 2011 Nov 22. Nucleic Acids Res. 2012. PMID: 22110030 Free PMC article.

4

SNP-VISTA: an interactive SNP visualization tool.

Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL. Shah N, et al. Among authors: minovitsky s. BMC Bioinformatics. 2005 Dec 8;6:292. doi: 10.1186/1471-2105-6-292. BMC Bioinformatics. 2005. PMID: 16336665 Free PMC article.

5

VISTA Region Viewer (RViewer)--a computational system for prioritizing genomic intervals for biomedical studies.

Lukashin I, Novichkov P, Boffelli D, Paciorkowski AR, Minovitsky S, Yang S, Dubchak I. Lukashin I, et al. Among authors: minovitsky s. Bioinformatics. 2011 Sep 15;27(18):2595-7. doi: 10.1093/bioinformatics/btr440. Epub 2011 Jul 26. Bioinformatics. 2011. PMID: 21791533 Free PMC article.

6

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing.

Das D, Clark TA, Schweitzer A, Yamamoto M, Marr H, Arribere J, Minovitsky S, Poliakov A, Dubchak I, Blume JE, Conboy JG. Das D, et al. Among authors: minovitsky s. Nucleic Acids Res. 2007;35(14):4845-57. doi: 10.1093/nar/gkm485. Epub 2007 Jul 10. Nucleic Acids Res. 2007. PMID: 17626050 Free PMC article.

7

The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons.

Minovitsky S, Gee SL, Schokrpur S, Dubchak I, Conboy JG. Minovitsky S, et al. Nucleic Acids Res. 2005 Feb 3;33(2):714-24. doi: 10.1093/nar/gki210. Print 2005. Nucleic Acids Res. 2005. PMID: 15691898 Free PMC article.

8

RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes.

Kazakov AE, Cipriano MJ, Novichkov PS, Minovitsky S, Vinogradov DV, Arkin A, Mironov AA, Gelfand MS, Dubchak I. Kazakov AE, et al. Among authors: minovitsky s. Nucleic Acids Res. 2007 Jan;35(Database issue):D407-12. doi: 10.1093/nar/gkl865. Epub 2006 Nov 16. Nucleic Acids Res. 2007. PMID: 17142223 Free PMC article.

9

TreeQ-VISTA: an interactive tree visualization tool with functional annotation query capabilities.

Gu S, Anderson I, Kunin V, Cipriano M, Minovitsky S, Weber G, Amenta N, Hamann B, Dubchak I. Gu S, et al. Among authors: minovitsky s. Bioinformatics. 2007 Mar 15;23(6):764-6. doi: 10.1093/bioinformatics/btl643. Epub 2007 Jan 17. Bioinformatics. 2007. PMID: 17234642 Free article.

10

Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data.

Dubchak I, Munoz M, Poliakov A, Salomonis N, Minovitsky S, Bodmer R, Zambon AC. Dubchak I, et al. Among authors: minovitsky s. Bioinformatics. 2013 Aug 15;29(16):2059-61. doi: 10.1093/bioinformatics/btt318. Epub 2013 Jun 4. Bioinformatics. 2013. PMID: 23736530 Free PMC article.

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