Emili A - Search Results

1

Retention of protein complex membership by ancient duplicated gene products in budding yeast.

Musso G, Zhang Z, Emili A. Musso G, et al. Among authors: emili a. Trends Genet. 2007 Jun;23(6):266-9. doi: 10.1016/j.tig.2007.03.012. Epub 2007 Apr 10. Trends Genet. 2007. PMID: 17428571 Review.

2

The extensive and condition-dependent nature of epistasis among whole-genome duplicates in yeast.

Musso G, Costanzo M, Huangfu M, Smith AM, Paw J, San Luis BJ, Boone C, Giaever G, Nislow C, Emili A, Zhang Z. Musso G, et al. Among authors: emili a. Genome Res. 2008 Jul;18(7):1092-9. doi: 10.1101/gr.076174.108. Epub 2008 May 7. Genome Res. 2008. PMID: 18463300 Free PMC article.

3

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins.

Hu P, Janga SC, Babu M, Díaz-Mejía JJ, Butland G, Yang W, Pogoutse O, Guo X, Phanse S, Wong P, Chandran S, Christopoulos C, Nazarians-Armavil A, Nasseri NK, Musso G, Ali M, Nazemof N, Eroukova V, Golshani A, Paccanaro A, Greenblatt JF, Moreno-Hagelsieb G, Emili A. Hu P, et al. Among authors: emili a. PLoS Biol. 2009 Apr 28;7(4):e96. doi: 10.1371/journal.pbio.1000096. PLoS Biol. 2009. PMID: 19402753 Free PMC article.

4

An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell.

Gong Y, Kakihara Y, Krogan N, Greenblatt J, Emili A, Zhang Z, Houry WA. Gong Y, et al. Among authors: emili a. Mol Syst Biol. 2009;5:275. doi: 10.1038/msb.2009.26. Epub 2009 Jun 16. Mol Syst Biol. 2009. PMID: 19536198 Free PMC article.

5

Systems-level approaches for identifying and analyzing genetic interaction networks in Escherichia coli and extensions to other prokaryotes.

Babu M, Musso G, Díaz-Mejía JJ, Butland G, Greenblatt JF, Emili A. Babu M, et al. Among authors: emili a. Mol Biosyst. 2009 Dec;5(12):1439-55. doi: 10.1039/B907407d. Epub 2009 Jul 31. Mol Biosyst. 2009. PMID: 19763343 Review.

6

The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses.

On T, Xiong X, Pu S, Turinsky A, Gong Y, Emili A, Zhang Z, Greenblatt J, Wodak SJ, Parkinson J. On T, et al. Among authors: emili a. Proteins. 2010 Jul;78(9):2075-89. doi: 10.1002/prot.22723. Proteins. 2010. PMID: 20455264

7

Experimental and computational procedures for the assessment of protein complexes on a genome-wide scale.

Musso GA, Zhang Z, Emili A. Musso GA, et al. Among authors: emili a. Chem Rev. 2007 Aug;107(8):3585-600. doi: 10.1021/cr0682857. Epub 2007 Jul 14. Chem Rev. 2007. PMID: 17630806 Review. No abstract available.

8

DAnCER: disease-annotated chromatin epigenetics resource.

Turinsky AL, Turner B, Borja RC, Gleeson JA, Heath M, Pu S, Switzer T, Dong D, Gong Y, On T, Xiong X, Emili A, Greenblatt J, Parkinson J, Zhang Z, Wodak SJ. Turinsky AL, et al. Among authors: emili a. Nucleic Acids Res. 2011 Jan;39(Database issue):D889-94. doi: 10.1093/nar/gkq857. Epub 2010 Sep 28. Nucleic Acids Res. 2011. PMID: 20876685 Free PMC article.

9

Filtering and interpreting large-scale experimental protein-protein interaction data.

Musso G, Emili A, Zhang Z. Musso G, et al. Among authors: emili a. Methods Mol Biol. 2011;781:295-309. doi: 10.1007/978-1-61779-276-2_14. Methods Mol Biol. 2011. PMID: 21877287

10

Characterization and evolutionary analysis of protein-protein interaction networks.

Musso G, Emili A, Zhang Z. Musso G, et al. Among authors: emili a. Methods Mol Biol. 2012;856:363-80. doi: 10.1007/978-1-61779-585-5_15. Methods Mol Biol. 2012. PMID: 22399467

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