Yan AK - Search Results

1

A complete algorithm to resolve ambiguity for intersubunit NOE assignment in structure determination of symmetric homo-oligomers.

Potluri S, Yan AK, Donald BR, Bailey-Kellogg C. Potluri S, et al. Among authors: yan ak. Protein Sci. 2007 Jan;16(1):69-81. doi: 10.1110/ps.062427307. Protein Sci. 2007. PMID: 17192589 Free PMC article.

2

A polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.

Langmead CJ, Yan A, Lilien R, Wang L, Donald BR. Langmead CJ, et al. J Comput Biol. 2004;11(2-3):277-98. doi: 10.1089/1066527041410436. J Comput Biol. 2004. PMID: 15285893

3

Structure determination of symmetric homo-oligomers by a complete search of symmetry configuration space, using NMR restraints and van der Waals packing.

Potluri S, Yan AK, Chou JJ, Donald BR, Bailey-Kellogg C. Potluri S, et al. Among authors: yan ak. Proteins. 2006 Oct 1;65(1):203-19. doi: 10.1002/prot.21091. Proteins. 2006. PMID: 16897780

4

A graphical method for analyzing distance restraints using residual dipolar couplings for structure determination of symmetric protein homo-oligomers.

Martin JW, Yan AK, Bailey-Kellogg C, Zhou P, Donald BR. Martin JW, et al. Among authors: yan ak. Protein Sci. 2011 Jun;20(6):970-85. doi: 10.1002/pro.620. Epub 2011 Apr 27. Protein Sci. 2011. PMID: 21413097 Free PMC article.

5

NMR structural inference of symmetric homo-oligomers.

Chandola H, Yan AK, Potluri S, Donald BR, Bailey-Kellogg C. Chandola H, et al. Among authors: yan ak. J Comput Biol. 2011 Dec;18(12):1757-75. doi: 10.1089/cmb.2010.0327. Epub 2011 Jun 30. J Comput Biol. 2011. PMID: 21718128 Free PMC article.

6

A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCs.

Martin JW, Yan AK, Bailey-Kellogg C, Zhou P, Donald BR. Martin JW, et al. Among authors: yan ak. J Comput Biol. 2011 Nov;18(11):1507-23. doi: 10.1089/cmb.2011.0173. Epub 2011 Oct 28. J Comput Biol. 2011. PMID: 22035328 Free PMC article.

7

High-resolution protein structure determination starting with a global fold calculated from exact solutions to the RDC equations.

Zeng J, Boyles J, Tripathy C, Wang L, Yan A, Zhou P, Donald BR. Zeng J, et al. J Biomol NMR. 2009 Nov;45(3):265-81. doi: 10.1007/s10858-009-9366-3. Epub 2009 Aug 27. J Biomol NMR. 2009. PMID: 19711185 Free PMC article.

8

Phase-independent rhythmic analysis of genome-wide expression patterns.

Langmead CJ, Yan AK, McClung CR, Donald BR. Langmead CJ, et al. Among authors: yan ak. J Comput Biol. 2003;10(3-4):521-36. doi: 10.1089/10665270360688165. J Comput Biol. 2003. PMID: 12935342

9

Continuous Interdomain Orientation Distributions Reveal Components of Binding Thermodynamics.

Qi Y, Martin JW, Barb AW, Thélot F, Yan AK, Donald BR, Oas TG. Qi Y, et al. Among authors: yan ak. J Mol Biol. 2018 Sep 14;430(18 Pt B):3412-3426. doi: 10.1016/j.jmb.2018.06.022. Epub 2018 Jun 18. J Mol Biol. 2018. PMID: 29924964 Free PMC article.

10

Rapid protein global fold determination using ultrasparse sampling, high-dynamic range artifact suppression, and time-shared NOESY.

Coggins BE, Werner-Allen JW, Yan A, Zhou P. Coggins BE, et al. J Am Chem Soc. 2012 Nov 14;134(45):18619-30. doi: 10.1021/ja307445y. Epub 2012 Sep 21. J Am Chem Soc. 2012. PMID: 22946863 Free PMC article.

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