Touzet H - Search Results

1

Predicting transcription factor binding sites using local over-representation and comparative genomics.

Defrance M, Touzet H. Defrance M, et al. Among authors: touzet h. BMC Bioinformatics. 2006 Aug 31;7:396. doi: 10.1186/1471-2105-7-396. BMC Bioinformatics. 2006. PMID: 16945132 Free PMC article.

2

Finding the common structure shared by two homologous RNAs.

Perriquet O, Touzet H, Dauchet M. Perriquet O, et al. Among authors: touzet h. Bioinformatics. 2003 Jan;19(1):108-16. doi: 10.1093/bioinformatics/19.1.108. Bioinformatics. 2003. PMID: 12499300

3

MAGNOLIA: multiple alignment of protein-coding and structural RNA sequences.

Fontaine A, de Monte A, Touzet H. Fontaine A, et al. Among authors: touzet h. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W14-8. doi: 10.1093/nar/gkn321. Epub 2008 May 30. Nucleic Acids Res. 2008. PMID: 18515348 Free PMC article.

4

Computational identification of protein-coding sequences by comparative analysis.

Fontaine A, Touzet H. Fontaine A, et al. Among authors: touzet h. Int J Data Min Bioinform. 2009;3(2):160-76. doi: 10.1504/ijdmb.2009.024849. Int J Data Min Bioinform. 2009. PMID: 19517987

5

Alignments of RNA structures.

Blin G, Denise A, Dulucq S, Herrbach C, Touzet H. Blin G, et al. Among authors: touzet h. IEEE/ACM Trans Comput Biol Bioinform. 2010 Apr-Jun;7(2):309-22. doi: 10.1109/TCBB.2008.28. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 20431150 Free article.

6

TFM-Explorer: mining cis-regulatory regions in genomes.

Tonon L, Touzet H, Varré JS. Tonon L, et al. Among authors: touzet h. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W286-92. doi: 10.1093/nar/gkq473. Epub 2010 Jun 3. Nucleic Acids Res. 2010. PMID: 20522509 Free PMC article.

7

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data.

Kopylova E, Noé L, Touzet H. Kopylova E, et al. Among authors: touzet h. Bioinformatics. 2012 Dec 15;28(24):3211-7. doi: 10.1093/bioinformatics/bts611. Epub 2012 Oct 15. Bioinformatics. 2012. PMID: 23071270 Free article.

8

DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.

Saad C, Noé L, Richard H, Leclerc J, Buisine MP, Touzet H, Figeac M. Saad C, et al. Among authors: touzet h. BMC Bioinformatics. 2018 Jun 11;19(1):223. doi: 10.1186/s12859-018-2215-1. BMC Bioinformatics. 2018. PMID: 29890948 Free PMC article.

9

miRkwood: a tool for the reliable identification of microRNAs in plant genomes.

Guigon I, Legrand S, Berthelot JF, Bini S, Lanselle D, Benmounah M, Touzet H. Guigon I, et al. Among authors: touzet h. BMC Genomics. 2019 Jun 28;20(1):532. doi: 10.1186/s12864-019-5913-9. BMC Genomics. 2019. PMID: 31253093 Free PMC article.

10

Comparative analysis of RNA genes: the caRNAc software.

Touzet H. Touzet H. Methods Mol Biol. 2007;395:465-74. doi: 10.1007/978-1-59745-514-5_29. Methods Mol Biol. 2007. PMID: 17993692

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