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The RAST Server: rapid annotations using subsystems technology.
Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. Aziz RK, et al. Among authors: overbeek ra. BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75. BMC Genomics. 2008. PMID: 18261238 Free PMC article.
Enabling comparative modeling of closely related genomes: example genus Brucella.
Faria JP, Edirisinghe JN, Davis JJ, Disz T, Hausmann A, Henry CS, Olson R, Overbeek RA, Pusch GD, Shukla M, Vonstein V, Wattam AR. Faria JP, et al. Among authors: overbeek ra. 3 Biotech. 2015 Feb;5(1):101-105. doi: 10.1007/s13205-014-0202-4. Epub 2014 Mar 8. 3 Biotech. 2015. PMID: 28324362 Free PMC article.
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655.
Gerdes SY, Scholle MD, Campbell JW, Balázsi G, Ravasz E, Daugherty MD, Somera AL, Kyrpides NC, Anderson I, Gelfand MS, Bhattacharya A, Kapatral V, D'Souza M, Baev MV, Grechkin Y, Mseeh F, Fonstein MY, Overbeek R, Barabási AL, Oltvai ZN, Osterman AL. Gerdes SY, et al. Among authors: overbeek r. J Bacteriol. 2003 Oct;185(19):5673-84. doi: 10.1128/JB.185.19.5673-5684.2003. J Bacteriol. 2003. PMID: 13129938 Free PMC article.
Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.
Kapatral V, Anderson I, Ivanova N, Reznik G, Los T, Lykidis A, Bhattacharyya A, Bartman A, Gardner W, Grechkin G, Zhu L, Vasieva O, Chu L, Kogan Y, Chaga O, Goltsman E, Bernal A, Larsen N, D'Souza M, Walunas T, Pusch G, Haselkorn R, Fonstein M, Kyrpides N, Overbeek R. Kapatral V, et al. Among authors: overbeek r. J Bacteriol. 2002 Apr;184(7):2005-18. doi: 10.1128/JB.184.7.2005-2018.2002. J Bacteriol. 2002. PMID: 11889109 Free PMC article.
Comparative genomics of NAD biosynthesis in cyanobacteria.
Gerdes SY, Kurnasov OV, Shatalin K, Polanuyer B, Sloutsky R, Vonstein V, Overbeek R, Osterman AL. Gerdes SY, et al. Among authors: overbeek r. J Bacteriol. 2006 Apr;188(8):3012-23. doi: 10.1128/JB.188.8.3012-3023.2006. J Bacteriol. 2006. PMID: 16585762 Free PMC article.
95 results