Kumagai M - Search Results

1

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Unusual evolution of interspersed repeat sequences in the Drosophila ananassae subgroup.

Nozawa M, Kumagai M, Aotsuka T, Tamura K; SMBE Tri-National Young Investigators. Nozawa M, et al. Among authors: kumagai m. Mol Biol Evol. 2006 May;23(5):981-7. doi: 10.1093/molbev/msj105. Epub 2006 Feb 8. Mol Biol Evol. 2006. PMID: 16467489

2

Rice Varieties in Archaic East Asia: Reduction of Its Diversity from Past to Present Times.

Kumagai M, Kanehara M, Shoda S, Fujita S, Onuki S, Ueda S, Wang L. Kumagai M, et al. Mol Biol Evol. 2016 Oct;33(10):2496-505. doi: 10.1093/molbev/msw142. Epub 2016 Jul 26. Mol Biol Evol. 2016. PMID: 27461246

3

Genetic diversity and evolutionary relationships in genus Oryza revealed by using highly variable regions of chloroplast DNA.

Kumagai M, Wang L, Ueda S. Kumagai M, et al. Gene. 2010 Aug 15;462(1-2):44-51. doi: 10.1016/j.gene.2010.04.013. Epub 2010 May 5. Gene. 2010. PMID: 20450965

4

Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish.

Cheung NKM, Nakamura R, Uno A, Kumagai M, Fukushima HS, Morishita S, Takeda H. Cheung NKM, et al. Among authors: kumagai m. PLoS Genet. 2017 Dec 21;13(12):e1007123. doi: 10.1371/journal.pgen.1007123. eCollection 2017 Dec. PLoS Genet. 2017. PMID: 29267279 Free PMC article.

5

Hypomethylated domain-enriched DNA motifs prepattern the accessible nucleosome organization in teleosts.

Nakamura R, Uno A, Kumagai M, Morishita S, Takeda H. Nakamura R, et al. Among authors: kumagai m. Epigenetics Chromatin. 2017 Sep 20;10(1):44. doi: 10.1186/s13072-017-0152-2. Epigenetics Chromatin. 2017. PMID: 28931432 Free PMC article.

6

Centromere evolution and CpG methylation during vertebrate speciation.

Ichikawa K, Tomioka S, Suzuki Y, Nakamura R, Doi K, Yoshimura J, Kumagai M, Inoue Y, Uchida Y, Irie N, Takeda H, Morishita S. Ichikawa K, et al. Among authors: kumagai m. Nat Commun. 2017 Nov 28;8(1):1833. doi: 10.1038/s41467-017-01982-7. Nat Commun. 2017. PMID: 29184138 Free PMC article.

7

Fusion of piggyBac-like transposons and herpesviruses occurs frequently in teleosts.

Inoue Y, Kumagai M, Zhang X, Saga T, Wang D, Koga A, Takeda H. Inoue Y, et al. Among authors: kumagai m. Zoological Lett. 2018 Feb 21;4:6. doi: 10.1186/s40851-018-0089-8. eCollection 2018. Zoological Lett. 2018. PMID: 29484202 Free PMC article.

8

Detection of non-reference porcine endogenous retrovirus loci in the Vietnamese native pig genome.

Ishihara S, Kumagai M, Arakawa A, Taniguchi M, Cuc NTK, Pham LD, Mikawa S, Kikuchi K. Ishihara S, et al. Among authors: kumagai m. Sci Rep. 2022 Jun 21;12(1):10485. doi: 10.1038/s41598-022-14654-4. Sci Rep. 2022. PMID: 35729348 Free PMC article.

9

Imputation approach for deducing a complete mitogenome sequence from low-depth-coverage next-generation sequencing data: application to ancient remains from the Moon Pyramid, Mexico.

Mizuno F, Kumagai M, Kurosaki K, Hayashi M, Sugiyama S, Ueda S, Wang L. Mizuno F, et al. Among authors: kumagai m. J Hum Genet. 2017 Jun;62(6):631-635. doi: 10.1038/jhg.2017.14. Epub 2017 Feb 16. J Hum Genet. 2017. PMID: 28202952

10

Population dynamics in the Japanese Archipelago since the Pleistocene revealed by the complete mitochondrial genome sequences.

Mizuno F, Gojobori J, Kumagai M, Baba H, Taniguchi Y, Kondo O, Matsushita M, Matsushita T, Matsuda F, Higasa K, Hayashi M, Wang L, Kurosaki K, Ueda S. Mizuno F, et al. Among authors: kumagai m. Sci Rep. 2021 Jun 13;11(1):12018. doi: 10.1038/s41598-021-91357-2. Sci Rep. 2021. PMID: 34121089 Free PMC article.

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