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Page 1
Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota.
Nou NO, Covington JK, Lai D, Mayali X, Seymour CO, Johnston J, Jiao JY, Buessecker S, Mosier D, Muok AR, Torosian N, Cook AM, Briegel A, Woyke T, Eloe-Fadrosh E, Shapiro N, Bryan SG, Sleezer S, Dimapilis J, Gonzalez C, Gonzalez L, Noriega M, Hess M, Carlson RP, Liu L, Li MM, Lian ZH, Zhu S, Liu F, Sun X, Gao B, Mewalal R, Harmon-Smith M, Blaby IK, Cheng JF, Weber PK, Grigorean G, Li WJ, Dekas AE, Pett-Ridge J, Dodsworth JA, Palmer M, Hedlund BP. Nou NO, et al. Among authors: harmon smith m. Nat Commun. 2024 Nov 4;15(1):9534. doi: 10.1038/s41467-024-53784-3. Nat Commun. 2024. PMID: 39496591 Free PMC article.
Synthetic genomes unveil the effects of synonymous recoding.
Nyerges A, Chiappino-Pepe A, Budnik B, Baas-Thomas M, Flynn R, Yan S, Ostrov N, Liu M, Wang M, Zheng Q, Hu F, Chen K, Rudolph A, Chen D, Ahn J, Spencer O, Ayalavarapu V, Tarver A, Harmon-Smith M, Hamilton M, Blaby I, Yoshikuni Y, Hajian B, Jin A, Kintses B, Szamel M, Seregi V, Shen Y, Li Z, Church GM. Nyerges A, et al. Among authors: harmon smith m. bioRxiv [Preprint]. 2024 Jun 16:2024.06.16.599206. doi: 10.1101/2024.06.16.599206. bioRxiv. 2024. PMID: 38915524 Free PMC article. Preprint.
Biochemical characterization of Fsa16295Glu from "Fervidibacter sacchari," the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3.
Covington JK, Torosian N, Cook AM, Palmer M, Bryan SG, Nou NO, Mewalal R, Harmon-Smith M, Blaby IK, Cheng JF, Hess M, Brumm PJ, Singh NK, Venkateswaran K, Hedlund BP. Covington JK, et al. Among authors: harmon smith m. Front Microbiol. 2024 Apr 25;15:1355444. doi: 10.3389/fmicb.2024.1355444. eCollection 2024. Front Microbiol. 2024. PMID: 38725686 Free PMC article.
Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert.
Nguyen TM, Pombubpa N, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen I-MA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Pietrasiak N, Stajich JE, Hom EFY. Nguyen TM, et al. Among authors: harmon smith m. Microbiol Resour Announc. 2024 Mar 12;13(3):e0098023. doi: 10.1128/mra.00980-23. Epub 2024 Feb 8. Microbiol Resour Announc. 2024. PMID: 38329355 Free PMC article.
Metatranscriptomes of two biological soil crust types from the Mojave desert in response to wetting.
Nguyen TM, Pombubpa N, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen I-MA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Pietrasiak N, Stajich JE, Hom EFY. Nguyen TM, et al. Among authors: harmon smith m. Microbiol Resour Announc. 2024 Feb 15;13(2):e0108023. doi: 10.1128/mra.01080-23. Epub 2024 Jan 8. Microbiol Resour Announc. 2024. PMID: 38189307 Free PMC article.
Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research.
Shaw C, Brooke C, Hawley E, Connolly MP, Garcia JA, Harmon-Smith M, Shapiro N, Barton M, Tringe SG, Glavina Del Rio T, Culley DE, Castenholz R, Hess M. Shaw C, et al. Among authors: harmon smith m. Front Microbiol. 2020 Nov 6;11:572131. doi: 10.3389/fmicb.2020.572131. eCollection 2020. Front Microbiol. 2020. PMID: 33240229 Free PMC article.
Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials.
Högfors-Rönnholm E, Lopez-Fernandez M, Christel S, Brambilla D, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Lundin D, Engblom S, Dopson M. Högfors-Rönnholm E, et al. Among authors: harmon smith m. Sci Data. 2019 Oct 16;6(1):207. doi: 10.1038/s41597-019-0222-3. Sci Data. 2019. PMID: 31619684 Free PMC article.
15 results