Lindorff-Larsen K - Search Results

1

Formation of native and non-native interactions in ensembles of denatured ACBP molecules from paramagnetic relaxation enhancement studies.

Kristjansdottir S, Lindorff-Larsen K, Fieber W, Dobson CM, Vendruscolo M, Poulsen FM. Kristjansdottir S, et al. J Mol Biol. 2005 Apr 15;347(5):1053-62. doi: 10.1016/j.jmb.2005.01.009. Epub 2005 Jan 27. J Mol Biol. 2005. PMID: 15784263

2

Barley lipid transfer protein, LTP1, contains a new type of lipid-like post-translational modification.

Lindorff-Larsen K, Lerche MH, Poulsen FM, Roepstorff P, Winther JR. Lindorff-Larsen K, et al. J Biol Chem. 2001 Sep 7;276(36):33547-53. doi: 10.1074/jbc.M104841200. Epub 2001 Jul 2. J Biol Chem. 2001. PMID: 11435437 Free article.

3

Calculation of mutational free energy changes in transition states for protein folding.

Lindorff-Larsen K, Paci E, Serrano L, Dobson CM, Vendruscolo M. Lindorff-Larsen K, et al. Biophys J. 2003 Aug;85(2):1207-14. doi: 10.1016/S0006-3495(03)74556-1. Biophys J. 2003. PMID: 12885664 Free PMC article.

4

Comparison of the transition state ensembles for folding of Im7 and Im9 determined using all-atom molecular dynamics simulations with phi value restraints.

Paci E, Friel CT, Lindorff-Larsen K, Radford SE, Karplus M, Vendruscolo M. Paci E, et al. Proteins. 2004 Feb 15;54(3):513-25. doi: 10.1002/prot.10595. Proteins. 2004. PMID: 14747999

5

Determination of an ensemble of structures representing the denatured state of the bovine acyl-coenzyme a binding protein.

Lindorff-Larsen K, Kristjansdottir S, Teilum K, Fieber W, Dobson CM, Poulsen FM, Vendruscolo M. Lindorff-Larsen K, et al. J Am Chem Soc. 2004 Mar 17;126(10):3291-9. doi: 10.1021/ja039250g. J Am Chem Soc. 2004. PMID: 15012160

6

Transition states for protein folding have native topologies despite high structural variability.

Lindorff-Larsen K, Vendruscolo M, Paci E, Dobson CM. Lindorff-Larsen K, et al. Nat Struct Mol Biol. 2004 May;11(5):443-9. doi: 10.1038/nsmb765. Epub 2004 Apr 18. Nat Struct Mol Biol. 2004. PMID: 15098020

7

Mapping long-range interactions in alpha-synuclein using spin-label NMR and ensemble molecular dynamics simulations.

Dedmon MM, Lindorff-Larsen K, Christodoulou J, Vendruscolo M, Dobson CM. Dedmon MM, et al. J Am Chem Soc. 2005 Jan 19;127(2):476-7. doi: 10.1021/ja044834j. J Am Chem Soc. 2005. PMID: 15643843

8

Simultaneous determination of protein structure and dynamics.

Lindorff-Larsen K, Best RB, Depristo MA, Dobson CM, Vendruscolo M. Lindorff-Larsen K, et al. Nature. 2005 Jan 13;433(7022):128-32. doi: 10.1038/nature03199. Nature. 2005. PMID: 15650731

9

Protein folding and the organization of the protein topology universe.

Lindorff-Larsen K, Røgen P, Paci E, Vendruscolo M, Dobson CM. Lindorff-Larsen K, et al. Trends Biochem Sci. 2005 Jan;30(1):13-9. doi: 10.1016/j.tibs.2004.11.008. Trends Biochem Sci. 2005. PMID: 15653321 Review.

10

Transition state contact orders correlate with protein folding rates.

Paci E, Lindorff-Larsen K, Dobson CM, Karplus M, Vendruscolo M. Paci E, et al. J Mol Biol. 2005 Sep 23;352(3):495-500. doi: 10.1016/j.jmb.2005.06.081. J Mol Biol. 2005. PMID: 16120445

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