Latombe JC - Search Results

1

Real-space protein-model completion: an inverse-kinematics approach.

van den Bedem H, Lotan I, Latombe JC, Deacon AM. van den Bedem H, et al. Among authors: latombe jc. Acta Crystallogr D Biol Crystallogr. 2005 Jan;61(Pt 1):2-13. doi: 10.1107/S0907444904025697. Epub 2004 Dec 17. Acta Crystallogr D Biol Crystallogr. 2005. PMID: 15608370

2

Modeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers.

van den Bedem H, Dhanik A, Latombe JC, Deacon AM. van den Bedem H, et al. Among authors: latombe jc. Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1107-17. doi: 10.1107/S0907444909030613. Epub 2009 Sep 16. Acta Crystallogr D Biol Crystallogr. 2009. PMID: 19770508 Free PMC article.

3

Algorithm and data structures for efficient energy maintenance during Monte Carlo simulation of proteins.

Lotan I, Schwarzer F, Halperin D, Latombe JC. Lotan I, et al. Among authors: latombe jc. J Comput Biol. 2004;11(5):902-32. doi: 10.1089/cmb.2004.11.902. J Comput Biol. 2004. PMID: 15700409

4

Efficient algorithms to explore conformation spaces of flexible protein loops.

Yao P, Dhanik A, Marz N, Propper R, Kou C, Liu G, van den Bedem H, Latombe JC, Halperin-Landsberg I, Altman RB. Yao P, et al. Among authors: latombe jc. IEEE/ACM Trans Comput Biol Bioinform. 2008 Oct-Dec;5(4):534-45. doi: 10.1109/TCBB.2008.96. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18989041 Free PMC article.

5

On the structure of the inverse kinematics map of a fragment of protein backbone.

Milgram RJ, Liu G, Latombe JC. Milgram RJ, et al. Among authors: latombe jc. J Comput Chem. 2008 Jan 15;29(1):50-68. doi: 10.1002/jcc.20755. J Comput Chem. 2008. PMID: 17542001

6

Computational models of protein kinematics and dynamics: beyond simulation.

Gipson B, Hsu D, Kavraki LE, Latombe JC. Gipson B, et al. Among authors: latombe jc. Annu Rev Anal Chem (Palo Alto Calif). 2012;5:273-91. doi: 10.1146/annurev-anchem-062011-143024. Epub 2012 Apr 9. Annu Rev Anal Chem (Palo Alto Calif). 2012. PMID: 22524225 Free PMC article. Review.

7

Using robotics to fold proteins and dock ligands.

Brutlag D, Apaydin S, Guestrin C, Hsu D, Varma C, Singh A, Latombe JC. Brutlag D, et al. Among authors: latombe jc. Bioinformatics. 2002;18 Suppl 2:S74. doi: 10.1093/bioinformatics/18.suppl_2.s74. Bioinformatics. 2002. PMID: 12385986

8

CARABEAMER: a treatment planner for a robotic radiosurgical system with general kinematics.

Tombropoulos RZ, Adler JR, Latombe JC. Tombropoulos RZ, et al. Among authors: latombe jc. Med Image Anal. 1999 Sep;3(3):237-64. doi: 10.1016/s1361-8415(99)80022-x. Med Image Anal. 1999. PMID: 10710294

9

Stochastic roadmap simulation: an efficient representation and algorithm for analyzing molecular motion.

Apaydin MS, Brutlag DL, Guestrin C, Hsu D, Latombe JC, Varma C. Apaydin MS, et al. Among authors: latombe jc. J Comput Biol. 2003;10(3-4):257-81. doi: 10.1089/10665270360688011. J Comput Biol. 2003. PMID: 12935328

10

Stochastic roadmap simulation for the study of ligand-protein interactions.

Apaydin MS, Guestrin CE, Varma C, Brutlag DL, Latombe JC. Apaydin MS, et al. Among authors: latombe jc. Bioinformatics. 2002;18 Suppl 2:S18-26. doi: 10.1093/bioinformatics/18.suppl_2.s18. Bioinformatics. 2002. PMID: 12385979

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